Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03476 ATGGGGTCCTGCTTCTCCGCGGAAAGCAGGAGCCCGTTTCCCACTTCACCCTCGGGTATCAGGAAAAGGAAGAACTCTAAAAAAAGGTCGGGATCACGAAGTTCTTCCTTTGAGTATTGGAGGGATGAACCCCTCCACAGAATTCCAGGGAGGCTGTTCCTGAATGGGTCTAGTGAAGTTGCGTCCTTGTTTACACAACAAGGCAAGAAAGGGACAAATCAAGATGCCATGATCGTTTGGGAGAATTTTTGTTCTAGAAAAGACACAGTCTTTTGTGGAGTTTTTGATGGCCATGGTCCATTTGGTCATATGGTTGCGAAAAAAGTGAGGGATTCTCTTCCTCTAAAACTGAGTGCAAACTGGGAGCTTAATGCATCTGGGGAGGAAGTCCTCAAAGAAATTAGCATTAATACCGCAGGAAGCGTGAATTCAGAAGAGGCGACCTTTGTATCTGCTGACGAGGAATCCAGGGCATCCGTTGATGctgaagaaacagaaaaacacCCTGAGATCTTTCAGACACTTAGAGAGTCGTTCCTTAAGGCATTTAAAGTCATGGACAGAGAACTGAAGATGCACCCAAGTATTGAGTGCTTTTGCAGTGGGACAACAGCAGTTACTCTGGTTAAGCAGGGCCGGGATCTTGTCATTGGAAACGTTGGCGACTCCCGAGCTGTGCTGGGTACGAGAGACAAAGATGATTCTCTTGTTGCAGTCCAGTTAACTGTTGATTTAAAACCCAGTCTTCCAGCGGAGGCAGAGAGAATCCGCAAATGTAAAGGGCGTGTTTTTGCTCTTCAGGACGAACCTGAGGTTGCCCGAGTCTGGTTGCCAAACTATGCCTCCCCCGGCCTTGCCATGGCCCGGGCTTTCGGAGATTTTTGCCTCAAAGATTTTGGTCTGATATCTGTTCCAGAGATATCCTACCGTCGCCTTAGCGAAAAGGACGAATTCATCGTGTTAGCAACAGATGGGATTTGGGATGTGCTGTCAAATAAAGAGGTGGTAGACATTATAGGAGCAGCTCCGGGACGTTCTTCGGCGGCGAGAGCATTGGTTGAGTCAGCAGTTCGGGCTTGGAGATATAAATACCCAACTTCCAAAATGGATGATTGCGCTGTGGTTTGCTTATTCCTAGAGTCTGACTCGGAATCCCATAAATTATGTAACGCTTCACATTCAACGAAGCATGAGAAGAGTAGTAGTACTAGTGTTAATGGTAGTCCTTCTGGACCAAGCCTCCTGAAGAGGTCAGGGACTTGCCGGGAAAGCAATGAGCAAGTGTCAGAGGAGGAGGAGATGGAATGGTCAGCTCTTGAGGGAGTATCTCGCGTAAACACATTATTGAATCTGCCAAGGTTTGTTCCTGACAAGCATGTGGCTGCCGATGGGATCGTCAGTATCAGAAAACGGAAATG 1418 0.469 MGSCFSAESRSPFPTSPSGIRKRKNSKKRSGSRSSSFEYWRDEPLHRIPGRLFLNGSSEVASLFTQQGKKGTNQDAMIVWENFCSRKDTVFCGVFDGHGPFGHMVAKKVRDSLPLKLSANWELNASGEEVLKEISINTAGSVNSEEATFVSADEESRASVDAEETEKHPEIFQTLRESFLKAFKVMDRELKMHPSIECFCSGTTAVTLVKQGRDLVIGNVGDSRAVLGTRDKDDSLVAVQLTVDLKPSLPAEAERIRKCKGRVFALQDEPEVARVWLPNYASPGLAMARAFGDFCLKDFGLISVPEISYRRLSEKDEFIVLATDGIWDVLSNKEVVDIIGAAPGRSSAARALVESAVRAWRYKYPTSKMDDCAVVCLFLESDSESHKLCNASHSTKHEKSSSTSVNGSPSGPSLLKRSGTCRESNEQVSEEEEMEWSALEGVSRVNTLLNLPRFVPDKHVAADGIVSIRKRK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03476 472 MobiDBLite consensus disorder prediction 1 35 - -
Bva04g03476 472 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 436 - -
Bva04g03476 472 MobiDBLite consensus disorder prediction 1 20 - -
Bva04g03476 472 PANTHER ALPHABET, ISOFORM E-RELATED 1 436 - -
Bva04g03476 472 Pfam Protein phosphatase 2C 106 356 IPR001932 -
Bva04g03476 472 MobiDBLite consensus disorder prediction 393 434 - -
Bva04g03476 472 CDD PP2Cc 60 379 IPR001932 -
Bva04g03476 472 Gene3D - 56 381 IPR036457 -
Bva04g03476 472 SUPERFAMILY PP2C-like 55 380 IPR036457 -
Bva04g03476 472 ProSiteProfiles PPM-type phosphatase domain profile. 60 379 IPR001932 -
Bva04g03476 472 SMART PP2C_4 51 377 IPR001932 -
Bva04g03476 472 MobiDBLite consensus disorder prediction 395 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03476 Bva-Chr4 27505884 27510374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03476 1 458 PP2C-type Phosphatase Gene Family AT3G02750 62.311 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03476 - - gmx:100782003 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03476 04 27505884 27510374 Bva04g03476 04 27505884 27510374 ECH