Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03474 ATGAGCTCGAAGGAGAGACCCACTCTTGGCGGTACGCGGATTAAGACCCGCAAACGGAATATTGCAGCACCACTGGACCCTGCAGCATTTTCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGAGCATTGAATCTTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTTGAGGTTGTTTTCACTGGGGGCCGTACACAACCTGGAACTACCAAGCCTGATGAGGGGGAGCGCCATCCTTACTCTATAATAGAGTATGAGCCAACGCGTGAAGTCATTTTACCATCTGTGATCTACATACAAATGATTTTGCGGCGAAGGCCATTTCTCATCAAGAACCTTGAAAATGTCATGCGAAGGTTCCTACAGTCCTTGGAGCTTTTTGAGgaaaatgagaggaaaaagTTGGCAATCTTCACTGCTCTTGCATTCTCCCAGAAGCTATCAGGTCTCCCACCAGAGACTGTGTTCCAACCACTTCTCAAAGATAATCTTGTGGCCAAAGGGCTAGTTCTGTCATTTATAACTGACTTCTTTAAGGAGTACCTGATTGACAACAGCCTTGATGATCTGATTTCAATTCTGAAACGGGGGAAAGTGGAGGACAACCTTTTGGACTTCTTTCCCTCTGCAAAAAGATCCAATGAGGCTTTCTCTGAGCATTTCCGCAAGGAAGGACTGGTGGCGTTAGTGGAgtataatgagaagaaaatctTTGAGGTGAAACTTAAGGAAATGAAGTCTGCTTTAACAACTCAGATAACTGAAGAAAGTGATATATCTGAAGTCATAGAAACTGTGAAGCAGCGAGTTAAAGATGCTAAATTGCCAGACATTGAGGCTGTGAGGGTTTTGTGGGATGTCTTAATGGACGCTGTTCAATGGTCAGGGAAAAATCAGCAACAGAATGCAAATGCAGCTCTGCGCCAGGTGAAAACTTGGGCAAAACTGCTAAATACTTTCTGTACCAGTGGGAAACTTGAGCTGGAATTGATGTACAAAGTACAGATGCAATGTTATGAGGATGCTAAGCTGATGAAGCTGTTTCCTGAGATTGTTAGGTCTCTTTATGAACAGGATGTGCTGGCTGAAGATACCATCCTTCATTGGTTCCGAAAAGGAACAAACGCCAAGGGCAGGCAAACCTTTGTGAAGGCTCTGGAACCCTTTGTTAATTGGCTAGAGGAGGCAGAAGAGGAGGAATA 1235 0.4324 MSSKERPTLGGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELVAKSIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHPYSIIEYEPTREVILPSVIYIQMILRRRPFLIKNLENVMRRFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFITDFFKEYLIDNSLDDLISILKRGKVEDNLLDFFPSAKRSNEAFSEHFRKEGLVALVEYNEKKIFEVKLKEMKSALTTQITEESDISEVIETVKQRVKDAKLPDIEAVRVLWDVLMDAVQWSGKNQQQNANAALRQVKTWAKLLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYEQDVLAEDTILHWFRKGTNAKGRQTFVKALEPFVNWLEEAEEEE 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03474 411 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 1 411 - -
Bva04g03474 411 CDD W2_eIF5C_like 216 404 IPR043510 -
Bva04g03474 411 Gene3D - 253 407 - -
Bva04g03474 411 ProSiteProfiles W2 domain profile. 246 411 IPR003307 GO:0005515
Bva04g03474 411 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 411 IPR003307 GO:0005515
Bva04g03474 411 SMART 542_3 325 410 IPR003307 GO:0005515
Bva04g03474 411 SUPERFAMILY ARM repeat 253 408 IPR016024 -
Bva04g03474 411 Coils Coil 121 141 - -
Bva04g03474 411 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03474 Bva-Chr4 27495192 27500660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03474 300 407 Eukaryotic Initiation Factors Gene Family AT2G34970 30.909 1.91e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03474 - - qlo:115991605 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03474 04 27495192 27500660 Bva04g03474 04 27495192 27500660 ECH