Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03471 ATGGAGATTAAcgataagaataataataacaatgaaaGCTTGATTTCGAGTTTCAACTTCAATTCCAACCAAGATGAAAATGTACAAGGTTTTCCTGGTTTCTCTGCTTCGCCAGCAAAACGCAGCATCGCTGAGAGGAGGGCAGCCAAATGTGGTTTCAATTCCGATGCGACCAGAATCAATACGGCTCGTTTTCGGACCACTAGCCCATTTGCTTCGCCTGCGCCTCGCTCTCCCTGTCTCACTATTCCTCCCGGTATTAGCCCCACCGCCTTGCTTGACTCCCCTATTATGCTTCCAAATTCTCAGGCAATGCCATCTCCCACCACTGGTACTTTTCTGTTGCCTCTCAGTCATGAAGGATCAATACTAACTTCTGTGACTCTCGAAGATGGAGATGGTGGTAATGGCAGTGACGCTGCTTCCGCTTTCAAATTCAAGGCCCATGGGGATCCTAATCCTCTACCAGCCGACCCGGGTTCTGAAAATCAGATTGCAAAGGGAGGAAATGCAGACTACCAACCACATCTTCCAGTTAAGCCGTCATCAGATTCTGCATTTTCATCAGAGTTTCCAAAAGGGCATACTACAACAAACAGTGAAGTTTGTTCAGACAATGTTGGAATGGTAGATGATGCAAATGCTAATGCTAATAATCTTGTAAGGCAAATGTGTCGCTCTGATGAAGTGAGCGATGAAAGCTATCTTCCGAAAAAGGCTATTCATGGCGAGGAAGGAGACCAGAGAGATTCATCTCACTCGATGGGATTGGCAAGGACCACAGAGGATGGATACAATTGGAGAAAATATGGACAAAAGCAAGTAAAAGGAAGTGAATATCCTAGGAGCTATTATAAATGTACCTATCCTAATTGTCAGGTCAAGAAAAAGGTAGAACGATCCCATGATGGCCAAATAACAGAAATCATCTATAAGGGTGCTCATAACCATGCAAAACCTCATCCTAGTCGTCGAACATCACTTGGATCAGTACTTTCTACAAATGATATATCAGACATGAGCGAAGGTAGTGGAACATGTGCTAAAAATGATGTTGGGTCTGTTTGGAGAAGTATTCCGCCAACGCTGAAGGATATAAAACACAGTTTGGATTGGAAAGCTGATGGTCAAGAAAGGACATCCTCAGCTTCTGTTGTAACTGAGCTATCGGATCTTGTATCAATTAACCAAGGTAAATCTGTGTGCAATTTTGAATCAGAGGACACTCCAGAcctttcttctactcttgCTAGTCATTGCgaggatgaagatgaagccACTCAAGGAAGCATATCACTTGAAGATGATGCTGATGACGAAGAATCTGAATCTAAAAGGAGGAAGAAAGAGAGCTGCTTGGTTGAAACAAACTTGGCTTCCAGGGCGGTCCGTGAGCCAAGAGTTGTAGTCCAAATTGAGAGCGAAGTGGACATACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAGGTTGTCAAAGGAAATCCAAACCCCAGGAGTTACTACAAATGCACAAGTGCTGGATGTTCTGTTAGGAAGCATGTGGAAAGAGCTTCACATGATCTAAAATATGTAATCACAACTTACGAGGGGAAACATAATCATGAAGTGCCTACTGCTAGAAACAGCAATCAGATAAGCTCAAGCAGCAGTGTACTTGCAGGTGCTGCTAACTCACAATTGCCTCTTACATTACCTGGAAATGCGAGCCTTGCAAAGCCTGAAACTCAAGTTCATAGTCTTGGACCTCATTTTGATAGAAAACCGGAATTTAGTCATGAGTTTCTGAGGCCCAATTTTGTTGGAAGTTTCAGCAACGAAATGAAATTTGGGTCTTCCTCTTTATGCCAAATGAAGTATTCTCCCTTGAATAATATCATGCCTTATGGTTCCTATGGACTAAATACTGACCGGTGTGCTGTCCCTCAAGGTGGTTCTATTGCATCAGTCTTTCCCGACTTACCAATGTCACTACCATTGAATATTCCGCCATCTGGAAATTTCCCTCTGCCTGGACTTAGTTATAACTGTGTAAAACCAATGGGGCGAGTCCAAGTCCAGTCTTTTATTTCAGGGCAGCAGCTGAAGGACATCGATAAAGGATTGCTGAGGCCCAAACAAGAGCAGAAGGATGATAATGTATACGATTCATGCATGCCCATTGTTGATCAAGCAAATGCTTCGTCTTCATTATATCACAGTGTCATGCAGAATTTTCCTTCGTA 2228 0.4215 MEINDKNNNNNESLISSFNFNSNQDENVQGFPGFSASPAKRSIAERRAAKCGFNSDATRINTARFRTTSPFASPAPRSPCLTIPPGISPTALLDSPIMLPNSQAMPSPTTGTFLLPLSHEGSILTSVTLEDGDGGNGSDAASAFKFKAHGDPNPLPADPGSENQIAKGGNADYQPHLPVKPSSDSAFSSEFPKGHTTTNSEVCSDNVGMVDDANANANNLVRQMCRSDEVSDESYLPKKAIHGEEGDQRDSSHSMGLARTTEDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCQVKKKVERSHDGQITEIIYKGAHNHAKPHPSRRTSLGSVLSTNDISDMSEGSGTCAKNDVGSVWRSIPPTLKDIKHSLDWKADGQERTSSASVVTELSDLVSINQGKSVCNFESEDTPDLSSTLASHCEDEDEATQGSISLEDDADDEESESKRRKKESCLVETNLASRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKYVITTYEGKHNHEVPTARNSNQISSSSSVLAGAANSQLPLTLPGNASLAKPETQVHSLGPHFDRKPEFSHEFLRPNFVGSFSNEMKFGSSSLCQMKYSPLNNIMPYGSYGLNTDRCAVPQGGSIASVFPDLPMSLPLNIPPSGNFPLPGLSYNCVKPMGRVQVQSFISGQQLKDIDKGLLRPKQEQKDDNVYDSCMPIVDQANASSSLYHSVMQNFPS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03471 742 ProSiteProfiles WRKY domain profile. 474 539 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03471 742 Gene3D WRKY domain 251 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03471 742 ProSiteProfiles WRKY domain profile. 256 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03471 742 MobiDBLite consensus disorder prediction 181 199 - -
Bva04g03471 742 SUPERFAMILY WRKY DNA-binding domain 472 539 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03471 742 MobiDBLite consensus disorder prediction 421 449 - -
Bva04g03471 742 MobiDBLite consensus disorder prediction 128 199 - -
Bva04g03471 742 SMART WRKY_cls 261 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03471 742 SMART WRKY_cls 479 538 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03471 742 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 39 722 IPR044810 GO:0003700
Bva04g03471 742 SUPERFAMILY WRKY DNA-binding domain 259 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03471 742 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 39 722 - -
Bva04g03471 742 Gene3D WRKY domain 466 532 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03471 742 Pfam WRKY DNA -binding domain 262 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03471 742 Pfam WRKY DNA -binding domain 480 537 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03471 Bva-Chr4 27483303 27487260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03471 43 542 WRKY Transcription Factor Family AT5G56270 43.186 2.54e-111 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva04g03471 WRKY 2.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03471 K18835 - gmx:100800211 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03471 04 27483303 27487260 Bva04g03471 04 27483303 27487260 ECH