Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03446 ATGAATTGCTTCCCGTGTTTTTCATCTCTGAGAAGTAAGAAAAACCTTAGCAAGAGGGAACACGACGATGCCCCACAAGAAAACGAACGGCCAAAAACGGAGGAGGAAGTAAATAATAAAGCGAAGGGTGATGATCAGCCCCAAGAAGAGCAGCCAACAGAAATTCAAGCACAAAATTTCACCTTCCGTGAGCTAGCAAGTGCAACTAAGAATTTCCGGCAGGAATGCCTCTTGGGTGAAGTCTATGAATTCATTTCTGGTGGTTCTCTGGAAGACCGTCTTTTTGGGAGTGGAGATAAAGCACCGTTAGATTGGTTCACGAGAATGAAAATAGCATCTGGTGGTGCGACAGGACTACAATACTTGCACGAGGATGCCAATCCTCCTGTTATATACCGGGACATGAAATCATCCAACATCTTGCTGGACGATGATCTTAACCCAAAACTAAACGATTTCGGACTTGCCAAGCTTGCTGGTGGAGATACCATGAATCCTGCAACTCAAAGAGTTATGGGCACTTATGGTTACAGTGCTCCAGAGTATGAAAGATCAAATAACCTCACTTTGAAATCAGACgtttatagttttggagttGTCCTATTAGAACTCATAACCGGGCGACGAGCCATTGATACTACGAGACCAAACCACGAGCAAAACCTTGTTCAATGGGCACAACCCATGTTCAGAGACCCAAAGAAGTTCCCAGACATGGCCGATCCACTTCTTAACAAACATTTCCCAGAAAAGGATTTGAATCAAGCAGTTGCTATAGCAGCCATGTGTCTGCAAGAGGAAGCAGCAGCACGTCCCTTAATCGGTGACGTGGTAACTGCTTTGAGTTTCCTTTCCATGGTTCCTCCAGAGGTTATTCCGGCCTCCCTCCCACCCCCCTCACCTTCTCAAGAGAGTGTTACTAGTGACGAGGAGGATTCTCATGGCCAAGAAACCAAGAATTTCTACTCCAAATCAAGCCGCAAACGCAGCAAGAGATCAAGGAACGGAAGCAATTCATCCAGCCAGAGAAGCAGCTCTGCTTCTTCTGAAGATGGAAGTGTTTCTTCAAGCCACAGGAGCAGTAGAAAATCAAAGAGCGTCAAGGGTGATTTAACCCAAAAGAGCAGCAGAAAAGCTTCTGTCAAAGCTAAAAGCCGCAAGGATGATGAAATTGTGAAATCAAAAGGTAGTAAAAGCAGCAAGAACGGCAGGAAATGTTCTGTGAGAGCTTTAAGCCACAAGAGTAGCATGGATTCATCAGAGGGTGAATCCCTTACGTTTGAGCAATGCAAGAGCAGGGCATCACGTGGAAACATTTCTTCTGGCAGCGATGAATCAGAGGAGGATGGACATGCTTCATATGAGCGCGGAGACAGCAGGGTATCTTTTGGCAGTGCAAGTGTTCAATCAGACAACAGCAACTGCTGCGAAGGATCAGAAGGAGAATG 1448 0.453 MNCFPCFSSLRSKKNLSKREHDDAPQENERPKTEEEVNNKAKGDDQPQEEQPTEIQAQNFTFRELASATKNFRQECLLGEVYEFISGGSLEDRLFGSGDKAPLDWFTRMKIASGGATGLQYLHEDANPPVIYRDMKSSNILLDDDLNPKLNDFGLAKLAGGDTMNPATQRVMGTYGYSAPEYERSNNLTLKSDVYSFGVVLLELITGRRAIDTTRPNHEQNLVQWAQPMFRDPKKFPDMADPLLNKHFPEKDLNQAVAIAAMCLQEEAAARPLIGDVVTALSFLSMVPPEVIPASLPPPSPSQESVTSDEEDSHGQETKNFYSKSSRKRSKRSRNGSNSSSQRSSSASSEDGSVSSSHRSSRKSKSVKGDLTQKSSRKASVKAKSRKDDEIVKSKGSKSSKNGRKCSVRALSHKSSMDSSEGESLTFEQCKSRASRGNISSGSDESEEDGHASYERGDSRVSFGSASVQSDNSNCCEGSEGE 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03446 482 MobiDBLite consensus disorder prediction 307 324 - -
Bva04g03446 482 SMART serkin_6 6 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03446 482 MobiDBLite consensus disorder prediction 442 456 - -
Bva04g03446 482 SUPERFAMILY Protein kinase-like (PK-like) 78 286 IPR011009 -
Bva04g03446 482 MobiDBLite consensus disorder prediction 335 355 - -
Bva04g03446 482 PANTHER OS07G0668900 PROTEIN 1 80 - -
Bva04g03446 482 Gene3D Transferase(Phosphotransferase) domain 1 85 287 - -
Bva04g03446 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bva04g03446 482 MobiDBLite consensus disorder prediction 363 397 - -
Bva04g03446 482 MobiDBLite consensus disorder prediction 293 482 - -
Bva04g03446 482 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03446 482 PANTHER OS07G0668900 PROTEIN 81 377 - -
Bva04g03446 482 Pfam Protein kinase domain 75 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03446 482 MobiDBLite consensus disorder prediction 460 482 - -
Bva04g03446 482 MobiDBLite consensus disorder prediction 14 49 - -
Bva04g03446 482 MobiDBLite consensus disorder prediction 14 52 - -
Bva04g03446 482 PANTHER RECEPTOR-LIKE KINASE LIP1 81 377 - -
Bva04g03446 482 PANTHER RECEPTOR-LIKE KINASE LIP1 1 80 - -
Bva04g03446 482 MobiDBLite consensus disorder prediction 412 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03446 Bva-Chr4 27371974 27374577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03446 1 80 Glycoside Hydrolase AT3G07070 43.182 5.16e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva04g03446 Pkinase 4.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03446 - - mnt:21389888 334.339