Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03444 ATGAGAATAAGAAAGCCGTCACTGCCGCCGCGGTTCCATTCCTTATTCTTCTTCCTAACAGTATTTAGATACTGTTTCCTGGTCACCCGTGTTTCAGGTGAATGCCCTATAAATGTGACTTCATACCAGTACGTGGCATTCGGAGAGTGCGGTGGGGTCCAAGAGAGCATAAGCAACTGGACTGGGAAAGGGAATGGGTTCCCAAGCACTTTGTGCTGCCGTGATGCCCTCACCGTTTTGTCCCAAGGGTTGGCGTTGCATGCACGTGCGTCACCACAGGAATCTCTGTTTGTTACCCAGGATGAATGGCAGAGTTGTGCTGAATCGTTTCATCCCCAGCCAGGGATGTCATTTAATTCCTGTGGCTTTGATATCTTGTATTCGGGCAGCAGCAAATGCTCCTCCACCCCTCGGTTGCGGGACATTCAGGCCAACAAAAGCTACCAACAAGCCTTAGACAAATGCTCCCACTTTGATCAACCATTTCCACAGACTTGTTCCGAATGCACAGATGCAATATTAAAAGTAAGGGATGCTTTCTATGAATTAACCGATGCAAAGGACAACATCACTGATACAGAAAGAGTGGTTTGTGGGGTAGCGGCGCTTGTTTCTGTTGCAGCTGGCAAACCGGAAGATCCTGCCGTAACAGACAAATTCTTACGCTGTTTCCTTAGTAACGTCCAAAATGACAATGGTCAGTTGGCAGCTTCTTCGACAAAACTTGTCCTTAACGTGTTTATAGCAATCGTTGGTATATCGATGATggtatttttggtaaaatatgTGAGCAAGAAGAAGCGTCCTAAACCGGTGAAGCCGAAAGAGATAGAGACATGGTCTGGATTGTACTGGTTCTCCAAAGCTGAAATTGAGAATGCTATAAATCATGAGGATGAAAGGAAATGCCTTGGACGTGGGAGTGCTGGCCAGGTCTACAAAGGAGTATTACCCAGCGGTCAAATTGTGGCCATCAAGCATCTAAGTAAGAGCAACAGCACTGATTCTTTCAATCGGGAAGTTGAGGGCCTTTCAAGGCTTCGTCATCCAAACCTCGTTTGTCTCTTTGGCTGTTGCAATGAAGATGGGGAGAGATATTTAGTCTATGAATATTGTGCAGCCGGCAATCTAGCTCAGCATCTATTAAGAAGAGACAGTCATTTGAAATGGGAAACAAGAGTTAAGATTTTGAGGGACTGCTCATATGCACTCAAATATCTCCACCATCATATGGAGGGCTGCGTTGTCCACAGAGATATTAAGcTGACGAACATCCTGTTGACTGAGAAGCACGAAGCAAAACTGTCGGATTTTGGGTTGGCAAGGATATTGAAGATTGAACAGAGCAAAGTATTCACAGATGTTAGAGGAACCATAGGATATATGGACCCAGAGTACATGAGTAATGCCAAATTAACGTGTGCCAGTGACATATACAGCTTtggtattgttattttacaGATTCTATCAGGACAGAAAGTGATAGAATTGGATCTCGATGCCAGAGATCAGCTCACCAGGAAGGCTAGAGACGTGAGTATGGGAAAACGTCCGCTGGAGGATTTTGAAGACCCACGGCTTAATGGACAAATTAACAAGGCAGATTTTGAAGCCATCTTACAGATTGCAGTGCTGTGCGTTGCTAAATCAAGCAAGGGTCGCCCGACCATTGAGGTTGTCTTTGAGGAATTGGACAAGGCCTATAAGAACAGCACCGGTCGTCACCAGAAAGGAAGCAGCACACCCACATCTACATCTACCCTTAGATCCTCAGAATTGGTTTG 1784 0.4473 MRIRKPSLPPRFHSLFFFLTVFRYCFLVTRVSGECPINVTSYQYVAFGECGGVQESISNWTGKGNGFPSTLCCRDALTVLSQGLALHARASPQESLFVTQDEWQSCAESFHPQPGMSFNSCGFDILYSGSSKCSSTPRLRDIQANKSYQQALDKCSHFDQPFPQTCSECTDAILKVRDAFYELTDAKDNITDTERVVCGVAALVSVAAGKPEDPAVTDKFLRCFLSNVQNDNGQLAASSTKLVLNVFIAIVGISMMVFLVKYVSKKKRPKPVKPKEIETWSGLYWFSKAEIENAINHEDERKCLGRGSAGQVYKGVLPSGQIVAIKHLSKSNSTDSFNREVEGLSRLRHPNLVCLFGCCNEDGERYLVYEYCAAGNLAQHLLRRDSHLKWETRVKILRDCSYALKYLHHHMEGCVVHRDIKLTNILLTEKHEAKLSDFGLARILKIEQSKVFTDVRGTIGYMDPEYMSNAKLTCASDIYSFGIVILQILSGQKVIELDLDARDQLTRKARDVSMGKRPLEDFEDPRLNGQINKADFEAILQIAVLCVAKSSKGRPTIEVVFEELDKAYKNSTGRHQKGSSTPTSTSTLRSSELV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03444 594 SUPERFAMILY Protein kinase-like (PK-like) 278 564 IPR011009 -
Bva04g03444 594 Pfam Protein kinase domain 302 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03444 594 MobiDBLite consensus disorder prediction 571 594 - -
Bva04g03444 594 Gene3D Phosphorylase Kinase; domain 1 270 371 - -
Bva04g03444 594 Pfam SPARK 32 189 IPR043891 -
Bva04g03444 594 ProSiteProfiles Protein kinase domain profile. 298 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03444 594 PANTHER OS01G0253100 PROTEIN 48 574 IPR045271 GO:0004714|GO:0006468
Bva04g03444 594 MobiDBLite consensus disorder prediction 573 594 - -
Bva04g03444 594 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 48 574 - -
Bva04g03444 594 Gene3D Transferase(Phosphotransferase) domain 1 373 587 - -
Bva04g03444 594 SMART serkin_6 298 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03444 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03444 Bva-Chr4 27366110 27368837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03444 255 567 Receptor kinase-like Gene Family AT2G19230 37.855 8.79e-56 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Bva04g03444 Pkinase 7.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03444 - - gmx:100807158 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03444 04 27366110 27368837 Bva04g03444 04 27366110 27368837 ECH