Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03443 ATGCAGTCCATGAATATTGAATTATTGGCCGGCCTCGAAATAGCTAGAGATGAGCTTGTGGTATGGGTTGTGGGCTTGCTTGGGCCTTGCGGCTTAGTCCATAACAATCTCCTTCTTAAGAAATGCATACAACATTATGGCGAAGGAAAGTGGCATCGCGTTCCTCTCTTGGCtgGTCTAAATAGATGCCGGAAAAGCTGTAGGCTAAGGTGGTTGAACTATCTTCGTCCCGACATCAAAAGAGGAAGCTTtgctgaagaagaagaagtggaACTCATAATCAAACTCCACAAACTGTTGGGTAACAGGTGGTCCCTGATCGCGGGAAGGACAGCCAACGATGTAAAGAACTACTGGAGCTGTCATTTGAGGGCACGGGATGAGGATGAATCTTCTGCTGCTCCACTAGACGTTGGCATCGCAATTCCTCCACCTACCATGTTTCATGGAGATGGGGATCATCAAATGCAAACAAAGGAGGATACTGTCAAAGTTTCTTGCTTAGACCAGCATGGAATTGGAGCTGGTGGTGGTGATCAGCTTCCAATTTG 551 0.4501 MQSMNIELLAGLEIARDELVVWVVGLLGPCGLVHNNLLLKKCIQHYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPDIKRGSFAEEEEVELIIKLHKLLGNRWSLIAGRTANDVKNYWSCHLRARDEDESSAAPLDVGIAIPPPTMFHGDGDHQMQTKEDTVKVSCLDQHGIGAGGGDQLPI 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03443 183 ProSiteProfiles Myb-like domain profile. 39 75 IPR001005 -
Bva04g03443 183 ProSiteProfiles Myb-like domain profile. 76 123 IPR001005 -
Bva04g03443 183 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 37 133 - -
Bva04g03443 183 Pfam Myb-like DNA-binding domain 87 119 IPR001005 -
Bva04g03443 183 Pfam Myb-like DNA-binding domain 38 75 IPR001005 -
Bva04g03443 183 CDD SANT 38 75 IPR001005 -
Bva04g03443 183 SMART sant 80 125 IPR001005 -
Bva04g03443 183 SMART sant 27 77 IPR001005 -
Bva04g03443 183 Gene3D - 35 80 - -
Bva04g03443 183 SUPERFAMILY Homeodomain-like 38 119 IPR009057 -
Bva04g03443 183 CDD SANT 87 123 IPR001005 -
Bva04g03443 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 127 IPR017930 -
Bva04g03443 183 PANTHER MYB TRANSCRIPTION FACTOR 37 133 - -
Bva04g03443 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 79 IPR017930 -
Bva04g03443 183 Gene3D - 84 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03443 Bva-Chr4 27363805 27365512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03443 25 129 MYB Transcription Factor Family AT1G66370 62.385 3.73e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva04g03443 Myb_DNA-binding 1.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03443 K09422 - gmx:100809746 172.555