Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03426 ATGGCGAACCGGTGGTGGGCCGGATCTGGGGGTCTTGCAGGAGTTGAAAACTCTGCTTACTCTCCTCCCTTGAAGAAACCAGATCTGGGTATCTCCATGAATGACAGTGGTGGTGGGAGAggcgaagaagaagaagaagaagaagagaaagaaaacagtgaTGAGCCCAAGGAAGGAGCTATCGAAGTGGCGACCACGCGTCGCCCTAGAGGGCGCCCACCAGGCTCCAAGAACAAGCCAAAGCCACCCATATATGTGACGAGGGAGAGCCCTGATGCCCTTCGAAGCCATGTGATGGAGATAGCAAGCGGAGCAGATATTACTGACTCTGTAGTTCAGTTCGCTAGAAAGCGTCAAAGAGGAGTCTGCGTTCTCAGTGGCAGCGGCACCGTCGTCAACGTCACTCTTCGCCAAACAAACGCCCCTGGCGCCGTTATGGCACTTCACGGCCGCTTCGAGATACTTTCATTGACCGGTTCGTTTCTTCCAGGACCGGCCCCACCAGGTTCTACCGGTTTAACCATATATCTTGCCGGAGTTCAAGGTCAAGTGGTCGGAGGTGTGGTGATGGGTCCCTTGGTGGCATCAGGACCTGTTATGATAATGGCAGCTACCTTTTCCAATGCCACATATGACAGATTACCCATAGAGGATATTGAAGAAGAAGCCCAAGGACAATTGACGGGCGGCGGAGGCGGTGGATCTCCTCCCATTCTTGACGGCAGTGGCGGCCAGCTGGCAGGTCCAGGTGGGACAATGGGAGAGGCTTCCTCATCCCTTCCAGTTTATAATCTTCAGTCGAATATGCTTGGTAACGGTGCACACTTGAATCATGAACTTTATAATTGGGCTCATGGTAGGTCATcgtatta 872 0.5057 MALHGRFEILSLTGSFLPGPAPPGSTGLTIYLAGVQGQVVGGVVMGPLVASGPVMIMAATFSNATYDRLPIEDIEEEAQGQLTGGGGGGSPPILDGSGGQLAGPGGTMGEASSSLPVYNLQSNMLGNGAHLNHELYNWAHGRSSY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03426 145 ProSiteProfiles PPC domain profile profile. 1 81 IPR005175 -
Bva04g03426 145 MobiDBLite consensus disorder prediction 79 108 - -
Bva04g03426 145 SUPERFAMILY AF0104/ALDC/Ptd012-like 3 75 - -
Bva04g03426 145 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 1 145 - -
Bva04g03426 145 Pfam Plants and Prokaryotes Conserved (PCC) domain 4 63 IPR005175 -
Bva04g03426 145 Gene3D - 1 81 - -
Bva04g03426 145 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 145 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03426 Bva-Chr4 27231596 27232535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03426 1 145 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.849 8.20e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03426 - - qsu:112038015 184.111