Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03423 ATGGAACAATCTGTTCTCGACGACATAATCAATCGTCTGCTTGAAGTTCGCGGCCGACCAGGGAAGCAAGTTCAGCTGTCGGAGTCTGAGATCCGCCAGCTTTGTGTTGTTTCGAGAGAGATTTTCTTGCAACAGCCTAATTTGTTGGAGCTTGAAGCACCCATTAAGATTTgtgGTGACATACATGGCCAATATTCCGATCTATTAAGGCTTTTTGAATATGGTGGATTACCTCCTGATGCCAACTACTTATTTTTGGGGGATTATGTAGATCGTGGGAAGCAGAGTTTAGAAACAATATGTCTTCTCCtggcatataaaataaaatctcccGAGAACTTTTTCCTCTTGAGGGGGAACCATGAATGTGCTTCTATAAACCGCATATATGGATTTTATGATGAGTGCAAGAGAAGATTTAATGTAGGATTATGGAAGACATTTACAGACTGCTTCAACTGCCTTCCAGTGGCTGCCCTTATCGATGAAAAGATTTTGTGTATGCATGGGGGGCTTTCACCAGACTTGCGTAATTTGGATCAGATTAGAAATCTTCAGCGGCCTACTGATGTGCCAGACACAGGTTTGCTTTGTGACCTCCTTTGGTCAGACCCCAGCAAAGATGTTCAAGGTTGGGGTATGAATGACAGGGGAGTCTCGTATACATTTGGTGCTGATAAGGTGTCAGAATTTCTTCAGAAGCATGATCTGGATCTTGTGTGCCGTGCTCATCAGGTTGTAGAGGATGGATACGAGTTCTTTGCTAATAGACAGCTTGTAACAATATTTTCGGCTCCAAATTATTGTGGAGAGTTTGACAATGCTGGTGCTATGATGAGTGTTGATGATACACTAATGTGCTCTTTCCAAATATTAAAGCCAGCTGATAAGAAAAAGTTCAATTTTGGAAGTACAACCACGGCTAAGCCTGGAAACACTCCAGCCAGTGTAAAGTCCTTCCTGGGTGCAAAAGTATG 977 0.4166 MEQSVLDDIINRLLEVRGRPGKQVQLSESEIRQLCVVSREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPDANYLFLGDYVDRGKQSLETICLLLAYKIKSPENFFLLRGNHECASINRIYGFYDECKRRFNVGLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLRNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKKKFNFGSTTTAKPGNTPASVKSFLGAKV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03423 325 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Bva04g03423 325 Gene3D - 1 304 IPR029052 -
Bva04g03423 325 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Bva04g03423 325 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Bva04g03423 325 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 319 - -
Bva04g03423 325 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Bva04g03423 325 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Bva04g03423 325 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Bva04g03423 325 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Bva04g03423 325 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Bva04g03423 325 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Bva04g03423 325 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Bva04g03423 325 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 319 - -
Bva04g03423 325 CDD MPP_PP1_PPKL 5 294 - -
Bva04g03423 325 SUPERFAMILY Metallo-dependent phosphatases 17 298 IPR029052 -
Bva04g03423 325 SMART pp2a_7 26 296 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03423 Bva-Chr4 27214349 27218028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03423 33 242 Calmodulin-binding Proteins AT5G63870 30.677 1.94e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03423 K06269 - gmx:100816262 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03489 13 23745351 23748894 Bva04g03423 04 27214349 27218028 ECH
Bva04g03423 04 27214349 27218028 Bva04g03423 04 27214349 27218028 ECH