Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03414 ATGAGGATTATGATAAAGGGTGGTATTTGGAAAAATACCGAGGATGAAATCTTAAAAGCAGCTGTTATGAAATATGGTAAGAACCAGTGGGCTCGAATCTCTTCGCTCCTGGTTCGCAAATCCGCCAAGCAATGTAAGGCTCGATGGTACGAGTGGCTTGATCCTTCTATTAAAAAGACTGAGTGGACTAGAGAAGAAGATGAGAAACTGCTACATCTTGCAAAGCTCATGCCCACACAGTGGAGAACAATTGCTCCAATTGTAGGCCGTACCCCTTCTCAGTGCCTTGAGAGATATGAGAAGCTCCTTGATGCAGCCTGTGTAAAGGATGAGAACTATGAACCTGGTGATGACCCCCGAAAATTGCGCCCCGGTGAGATTGATCCAAACCCAGAATCAAAACCTGCACGACCAGACCCTGTTGATATGGATGAGGATGAGAAGGAAATGCTGTCTGAAGCAAGGGCTCGGTTAGCCAACACTAAAGGCAAgaaggcaaaaagaaaagccagGGAGAAACAGCTTGAGGAAGCCAGGAGGCTTGCTTCCTtgcagaaaaagagagagttgAAGGCTGCTGGAATTGATATTAGGAAGCggaagaggaaaaggaaaggaatagACTACAATGCAGAAATTCCCTTTGAGAAAAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAAGATAGACCAGTAGAGCAGCCCAAGTTCCCTACCACAATTGAAGAACTTGAGGGAAAACGAAGAGCTGACGTGGAAGCACAATTAAGAAAGCAAGACAttgcaaagaataaaattgcaGAGAGGCAAGATGCTCCATCAGCTATACTGCATGCCAACAAGCTGAATGATCCAGAAACAGTTAGAAAGAGGTCAAAACTAATGCTTCCTCCACCCCAGATTTCTGATCATGAATTGGAAGAAATTGCAAAGATGGGTTATGCTAGTGACCTTGCTGGTAGTGAAGAACTTACAGAGGGTAGTGGCGCAACACATGCTCTTCTTGCAAATTATGCACAGACACCAAGCCAGGGAATGACTTCTTTACGCACTCCTCAGAGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAGAATTTGGCTAGGTTAAGAGAGTCTCAGACGCCATTGTTAGGAGGAGAGAACCCAGAGTTGCATCCTTCAGATTTCTCTGGGGTAACTCCTAAGAGAAAGGACATTCAGACTCCAAATCCCATGCTGACTCCCTCATCAACCCCTGGAGTTGCAGGTCTTACTCCTAGAAGTAGTATGACACCGGCAAGGGATGGTGTTTCTTTTGGCATGACCCCAAGAGGAACTCCTCTTAGGGATGAGCTTCATATTAATGATATGGATGTTCATGACAGTGCAAAACTTGAGCTACAGAGACAAGCTGATGTGAGAAGAAGTTTGCACTCTGGTTTAAGCAGTCTTCCACAACCCAAAAATGAGTACCAAATAGCCATGGAACCAATTCCTGAAGATGCTGAAGAACCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATAGCTAGAGAAAAGGCCGAAGAAGAAGCACTGCAGCAGGCATTACTTAGAAAAAGATCAAAAGTACTCCAGAGGGAGCTTCCAAGGCCTCCTGCTGAATCATTGGAACTTATAAGAAATTCCTTGATGAGAGCTGATGTTGACAAGAGTTCTTTTGTTCCACCTACCTTTACTGAGCAAGCTGATGAGATGATAAGAAAGGAGCTTCTGACCTTACTGGAACATGACAATGCTAAATATCCACTTGACGAAAAAGTTaataaggagaaaaagaaaggaggcAAGCGCACTGCAAATTCTTCTGCTGCCATCCCTGTGTTAGAAGATTTTGAGGAAGATGAGATGAAACATGCTTATCATTTGATAGAGGAGGAGGCTCAGTATCTTCGTGTAGCAATGGGGCATGAAAGCGAACCCCTTGATGAATTTATTGAAGCACATAGAACTTGCCTTAATGATCTGACGTATTTTCCTACTCGTAATGCCTATGGTCTCTCAAGTGTTGCTATAAACACGGAGAAACTTGCCGCTTTGCAGAATGAATTTGAGAGTgtgagaaataaatttgaagatgGTAAGGAGAAAGTTGCACGCCTTGAGAAGAAAGTGATTGTTCTCACACAAGGCTATGAGATGCGGGCCAGAAAAGGTCTTTGGCCACAAATTGAGGCCACCTTCAAGCAGATGGCTACTGCTGCAACAGAGCTAGAATGCTTTCAAGTTTTGCAAAAGCAGGAGCAACTAGCAGCATCTCACCGGATAAATAATCTATGGGCAGAAGTGCAGAAGCAAAAGGAACTTGAGAAAACTTTACAGAAGAGGTATGGAGATCTTCTGACAGAGCAggaaaggataaaaaatatcatggaCCAATACCGCATACAAGCACAACAGCAAGAAGAAATTGCTGCAAACAATCGTGCTGTTGAGTTAGCTGAGGCTGCAGCTAAGCAAATTAGCATGGAGGGTACAGATAATTGTCAAGCTGTAACATCCTCAGATGAGGTTGGAAGTGCTATGGTAGGTGGTACACCTCATGTTGAAACTGCTGACCAGCAAGTAGAAGTTGTGCAACACCAGATCTCTTCAACCCACAAACACGGTATGGATGTGGATGCTGATATAGAACAAACGACACACAATATTGGCGCAAAATTAGCAGATTCTGTCTCTGCTACTGAGGGGGACAGCGCAACACTGATAGAAGGTAGTAGTGTTGATGGTCACATTGCTAATGGAGAGACCGCTTGTAATGTGGGTGGTTCCGAGGATATAAGTAGTGTTAAGGGAAACAAGGTGGTTCGAGATGTTGTGGAAGCCATAAACTCACGAGATAGCATTATACAGGAAACCCCCCCCACTTG 2906 0.4219 MRIMIKGGIWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRKRKRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPKFPTTIEELEGKRRADVEAQLRKQDIAKNKIAERQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDHELEEIAKMGYASDLAGSEELTEGSGATHALLANYAQTPSQGMTSLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRKDIQTPNPMLTPSSTPGVAGLTPRSSMTPARDGVSFGMTPRGTPLRDELHINDMDVHDSAKLELQRQADVRRSLHSGLSSLPQPKNEYQIAMEPIPEDAEEPEEKIEEDMSDRIAREKAEEEALQQALLRKRSKVLQRELPRPPAESLELIRNSLMRADVDKSSFVPPTFTEQADEMIRKELLTLLEHDNAKYPLDEKVNKEKKKGGKRTANSSAAIPVLEDFEEDEMKHAYHLIEEEAQYLRVAMGHESEPLDEFIEAHRTCLNDLTYFPTRNAYGLSSVAINTEKLAALQNEFESVRNKFEDGKEKVARLEKKVIVLTQGYEMRARKGLWPQIEATFKQMATAATELECFQVLQKQEQLAASHRINNLWAEVQKQKELEKTLQKRYGDLLTEQERIKNIMDQYRIQAQQQEEIAANNRAVELAEAAAKQISMEGTDNCQAVTSSDEVGSAMVGGTPHVETADQQVEVVQHQISSTHKHGMDVDADIEQTTHNIGAKLADSVSATEGDSATLIEGSSVDGHIANGETACNVGGSEDISSVKGNKVVRDVVEAINSRDSIIQETPPT 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03414 968 CDD SANT_CDC5_II 55 106 - -
Bva04g03414 968 MobiDBLite consensus disorder prediction 399 423 - -
Bva04g03414 968 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Bva04g03414 968 SMART sant 58 105 IPR001005 -
Bva04g03414 968 SMART sant 6 55 IPR001005 -
Bva04g03414 968 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Bva04g03414 968 Coils Coil 508 528 - -
Bva04g03414 968 Coils Coil 682 716 - -
Bva04g03414 968 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Bva04g03414 968 Coils Coil 167 187 - -
Bva04g03414 968 Gene3D - 60 114 - -
Bva04g03414 968 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Bva04g03414 968 MobiDBLite consensus disorder prediction 113 150 - -
Bva04g03414 968 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 847 - -
Bva04g03414 968 PANTHER - 1 847 - -
Bva04g03414 968 Pfam Myb-like DNA-binding domain 10 70 - -
Bva04g03414 968 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Bva04g03414 968 MobiDBLite consensus disorder prediction 380 446 - -
Bva04g03414 968 MobiDBLite consensus disorder prediction 222 237 - -
Bva04g03414 968 MobiDBLite consensus disorder prediction 213 237 - -
Bva04g03414 968 Gene3D - 5 59 - -
Bva04g03414 968 CDD SANT 10 53 IPR001005 -
Bva04g03414 968 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03414 Bva-Chr4 27141227 27146530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03414 1 838 MYB-Related Transcription Factor Family AT1G09770 74.113 0.0 1204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva04g03414 Myb_Cef 1.7e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03414 K12860 - gmx:100790369 1423.68