Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03396 ATGTCTTCGTCTTTTCCTGTTCTTCCCACTCCTCTTGAAGACAAGTACGTGAAACCCCCAGATTCTTGTCAGCTATCCACTGTCCGAGATCTGACCACAAATCCTTCTTCTGTGCAGGCTTCTCCATTAAATCCCTATGACATCCCTATTTCCTCAGTTTCAAAAGTGAAATTTCAAGATTCTCCCTTCATAACTAGGACATTAGTTGACAGTGTGTCTTTCTCACCTACACAATTCATTTCTCACCCTCAGGAAACTAATGATATTTCCTGGTGTTCAGATCCATTTCAggattttcttaattttcctgAAAATATTTCCCTCCAGAATGAACATGTTGAAAGTAGTGCTTGTTACATATCTGATGACAATGTCAAAAAAGCTTATTTTGTGGAGTGGGTTGATCAATTAATATCAGTTGATGAATCTCTGCACCCAAATTGGAGTCAGCTTTCGGGAGATGATAATGTGGCAGATTCAAAATCAAAGGAGACCGAGGTTTCCCAGCTGCAGCAAGTACCATCTGGAGAAGTTAATGCCCCACCTAACTCAGTTTCTACTGTACCACCAACTAAACCAAGAATGCGTTGGACTCCAGAACTTCACGAGGCCTTTGTTGAAGCAGTCAATCAACTTGGTGGTAGTGAGAAGGCTACTCCAAAAGGTGTCTTGAACCTCCTGAAAATTGACGGCCTTACCATCTATCATGTGAAGAGCCATCTACAGAAGTATAGAACTGCCAGATGCAAACCTGAGTCATCCGAAGGAACTTCTGAGAAGAAGCTGACATCAGTCGAAGAAATGAAATCTCTGGACTTAAAAACGAGTACGGGGATCACTGAAACATTGCGATTGCAGATGGAACTCCAGAAACGGCTTCATGAACAACTTGAGATTCAAAGAAAGTtgcaaattgaaattgaaaaccaAGCAAAACGTCTTCAAATGATGTTTGAGCAACGAGATGGCAAGCTCAAGGCCCCTTCCTCTTCCTTGGATGATCCCTCGGCTCCACCATTAAATACGGTGCTATCTTCCCCTCCTATTGACAATTTGGCAATCTCAAATGAGGGTCATGCCAAATCTGGAATCAGCTTTAGCATTGCAAAAACCATTTCAGAAGAAAGTTCCCTTGATGCAAGTGCAAAGCAAAAGGAAGATGAAAGTAAAAGTACAGATGAACATGTGCTAGGGGATTATCAGTGCGGTGCACCACCCGCAAAACGGGCAAAGAGTGGATGTTA 1244 0.4124 MSSSFPVLPTPLEDKYVKPPDSCQLSTVRDLTTNPSSVQASPLNPYDIPISSVSKVKFQDSPFITRTLVDSVSFSPTQFISHPQETNDISWCSDPFQDFLNFPENISLQNEHVESSACYISDDNVKKAYFVEWVDQLISVDESLHPNWSQLSGDDNVADSKSKETEVSQLQQVPSGEVNAPPNSVSTVPPTKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLLKIDGLTIYHVKSHLQKYRTARCKPESSEGTSEKKLTSVEEMKSLDLKTSTGITETLRLQMELQKRLHEQLEIQRKLQIEIENQAKRLQMMFEQRDGKLKAPSSSLDDPSAPPLNTVLSSPPIDNLAISNEGHAKSGISFSIAKTISEESSLDASAKQKEDESKSTDEHVLGDYQCGAPPAKRAKSGC 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03396 414 MobiDBLite consensus disorder prediction 171 191 - -
Bva04g03396 414 MobiDBLite consensus disorder prediction 375 414 - -
Bva04g03396 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 249 IPR017930 -
Bva04g03396 414 Gene3D - 191 250 - -
Bva04g03396 414 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 412 IPR044848 GO:0003700
Bva04g03396 414 MobiDBLite consensus disorder prediction 1 23 - -
Bva04g03396 414 Pfam MYB-CC type transfactor, LHEQLE motif 279 320 IPR025756 -
Bva04g03396 414 MobiDBLite consensus disorder prediction 321 344 - -
Bva04g03396 414 SUPERFAMILY Homeodomain-like 190 246 IPR009057 -
Bva04g03396 414 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 192 246 IPR006447 GO:0003677
Bva04g03396 414 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 412 - -
Bva04g03396 414 MobiDBLite consensus disorder prediction 171 193 - -
Bva04g03396 414 Pfam Myb-like DNA-binding domain 194 245 IPR001005 -
Bva04g03396 414 MobiDBLite consensus disorder prediction 379 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03396 Bva-Chr4 27071105 27076122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03396 78 347 G2-like Transcription Factor Family AT3G04450 52.365 7.02e-78 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva04g03396 Myb_DNA-binding 2.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03396 - - mtr:MTR_7g115530 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03470 13 23658455 23663579 Bva04g03396 04 27071105 27076122 ECH
Bva04g03396 04 27071105 27076122 Bva04g03396 04 27071105 27076122 ECH