Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03388 ATGGGGACTCCAGTGAATATAAATGTAGGCTCTCATGTCTGGATTGAAGACCCAGAGGTGTGTTGGATTGATGGACAGGTATCAAAAATTACTGGGAAGGATGCTGAGATTGAAACTACCAATGGAAAAAAGGTTGTTGcgaatttatcaaaaatatatccCAAAGATATGGAAGCTCCTGCTGGTGGAGTGGATGATATGACAAAGCTATCCTATTTGCACGAGCCCGGTGTCCTTCAGAACTTAAAAACCAGATATGaattgaatgaaatatatACTTATACTGGAAATATTCTTATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGATTCGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAATTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATTTAGGGCGATGATTAATGAAGCAAAAAGTAATTCAATTCTTGTTAGCGGGGAAAGTGGAGCTGGAAAAACTGAAACTACTAAAATGCTCATGCGATACCTTGCTTACTTAGGTGGTAGGGCTGGTACTGAAGGACGGACGGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCCAAAACTGTTAGAAACAACAATTCCAGCCGCTTTGGTAAATTTGTTGAGATCCAATTTGATAAACATAGAAGAATCTCAGGGGCAGCCATCAGAACTTACCTTCTCGAGAGGTCTCGGGTTTGCCAAGTTAATGATCCTGAACGCAACTATCACTGCTTTTATCTTCTTTGTTCTGCGCCACAGGAGGAAATTGAGAAATACAAATTAGGACCTCCTAGCTCTTTTCACTACCTTAACCAGTCAAAATGTTATGAACTGGTTGATGTAAGTGATGCTCGTGAATATCTTGCCACCAGGAGAGCTATGGATATTGTTGGAATAAGCCAAAAAGATCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATCTTGGTAACATTGAATTTGCCAAAGGAAAGGAAGTTGACTCATCAGTTCTAAAAGATGACAAAGCCAAATTCCACCTGAAAACGTGTGCTGAGCTTCTCATGTGTGATGCTGATGCCTTGCAAGATGCGTTATGTAAGCGTGTCATGATCACCCCAGAAGAAGTTATAAAACGAAGCCTTGATCCCCAAAGTGCAGCTGTCAGCAGAGATGGCCTtgcaaaaacaatttattctaGACTATTTGACTGGTTGGTGGATAAGATTAATAGTTCAATTGGACAAGATCCCAGTTCGAAATGTTTGATTGGTGTCCTTGATATCTATGGTTTCGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAACCAGCACGTGTTTAAGATGGAACAAGAAGAATATACAAAGGAGCAGATTAATTGGAGCTACATTGAATTTGTTGACAATCAAGATGTTCTGGACCTTATTGAAAAGaAACCTGGTGGAATCATTGCTCTGCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACACGAAACATTTTCAAACAAGctttatcaaacattcaagAGTCACAAGCGCTTTATAAAGCCAAAATTGTCCCGAACGGATTTCACCATTGCTCATTATGCTGGGGAGGTCCTATACCAGTCTGAccaatttttagataaaaataaggaTTATGTGGTTCCTGAACATCAAGATTTGTTGAGTGCTTCCAAATGTTCTTTTGTAGCAGGCCTTTTCCCTGTAATTCAAGACCAGTCATCCAAATCTGCTAAGTTTTCTTCCATTGGTTCTCGTTTTAAGCTACAACTACAGCAACTAATGGAGACACTAAACTCTACGGAGCCTCATTACATCAGATGTGTAAAACCAAACAACCTCCTCAAACCTGCAATATTCGAGAATGTCGGAGTCATGCAGCAACTTCGCTGTGGTGGTGTTTTAGAGGCAATTAGAATTAGTTGTGCTGGCTACCCTACTCGCCGtactttctttgaattttctaaCCGATTTGGGCTCCTTGCCCCTGAGGCCATGGAAGGAAACTACGACGAAAAGGTTGTTTGCCAAAAGATTCTGGAAAAGGTTGGGCTTAAAGGATACCAGATTGGGAAAACAAAGGTATTCCTCAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCAAGTACTCAGTAATGCAGCCAAAACCATCCAACGGCGCATACGTACCCATCAAGCTCGTAAACATTATCTTGCATTGCGAATGGTTACCATATTTGTGCAGTCTTTTTGTAGAGGAAGACTTGCATGCAAACTCTACGACAACATTAGAAGGGAGGCTGCTGCTAAGAAAATTCAGAAGAACACACACAGATATCAAGCTAGGAAAGCCTATAAGAGACTCCAGGCGTCAGCACTTACCGTGCAAACAGGCTTAAGGGCAATAGCTGCTTGTAAAGAATTCAGGTTTAGGAAACAGACAAAAGCAGCCATTATTATTCAGGCTCGATGGCGATGCCACAGAGCAACCTCATATTACAAGAGGCTCAAGAAAGGTGCAATATTTACACAATGCAGATGGAGGGGGCGCGTGGCTAGAAGAGAACTTAGGAAACTCAAAATGGCTGCAAGAGAAACAGGTGCACTTCAAGAAGCAAAGAATAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAAttagaaaaaagtttaagGACAAACCTAGAAGAAGCCAAAGCACAAGAGATAGCAAAACTGCAGAATTCACTACAGGAGATGCAGGGCAAACTTGATGAAAGCAATGCTTTGCTTATTAAGGAGCGAGAAAATGCAAAGAAGATCGTCGAAGAAGCACCTCCTGTTATACAAGAGACCCAGGTTCTTGTTGAAGACACGCAAAAAATTGAGTCACTAACAGCAGAAGTTGAGAACCTAAAGACTTCACTTGaggcagagaaagagaaagccGATgactttgaaagaaaatacaaagaagCCCAAGTTTATGGTGAAGAACGACGCCAAAAATTAGAAGATACAGAGAAGAAGGTTCAGCAGCTTCAGGAATCATTGACCAGGCTAGAAGAGAAGATTACTAATTTGGAATCAGAAAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGCTCTAGATCTATTCTTCAGAGAGGTGATAGCGGTCACATTGGGGTGGAAGCAAAGCCATCTTTGGATCTACATAGCCCATCAATGAACCAGAGAGACTCCTCTGAAGTGGACGACAAGCCACAAAAGTCGCTCAATGAGAAACAACAGGAGAACCAAGAGTTGCTCATTAGATGTATTGCACAACATCTAGGCTTTGCCGGCAACAGACCAATTGCTGCCTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTAGAGCGTACTAGTGTTTTTGACCGTATCATCCAAACTGTAGGCCATGCGATTGAGACTCAGGATAACAATGATATCTTGGCTTATTGGTTATCCAatgcctctacacttctctTGTTACTCCAGCGCACGCTTAAGGCAAGTGGTGCTGCTGGAATGGCTCCACAACGCCGTCGTTCTTCATCAGCTACCCTATTTGGGAGGATGACacaaAGTTTCCGTGGAAGTCCAGCAGGAGTCAATCTTTCTCTAATTAATGGTAGCATGAGTGGGGGAGTACAGGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTTACAGCATATGTAGAAAAGATATATGGAATGATTCGAGATAATCTGAAGAAGGAAATTTCTCCCTTGCTCGCATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAGGGATCATCACGTTCAGTTGCAAACACCGAAGCCCAGCGAACTTTGATTGCTCACTGGCAGGGGATAGTTAAAAGCCTTGGGaactttttgaataatttgaagGCAAATCATGTTCCGCCATTTTTAGTTCGTAAGGTGTTTAcgcaaattttttctttcatcaatgTTCAACTATTCAATAGTCTTCTATTAAGACGAGAGTGCTGCTCATTTAGTAATGGAGAATATGTCAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCAACAGATGAGtatGCAGGTTCAGCCTGGGACGAGCTTAAACATATCAGACAGGCTATTGGATTTCTGGTCATACATCagaaaccaaagaaaacaCTGGATGAAATAAGCCATGACTTGTGCCCAGTCCTCAGTATACAACAGCTTTATCGAATTAGCACCATGTACTGGGATGACAAGTATGGTACGCATAGTGTGTCCCCTGATGTCATATCCAATATGAGGGTGTTGATGACTGAAGATTCAAATAATGCAGTCAGTAATTCTTTCTTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATATCCAAGTCAATGGAACAAATAGATATCAATGATATTGAACCGCCACCACTTATCCGTGAGAACTCCGGCTTTAGTTTCTTGTTGCCGCGCCCAGATTG 4577 0.3983 MGTPVNINVGSHVWIEDPEVCWIDGQVSKITGKDAEIETTNGKKVVANLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDSHMMQQYKGAPFGELSPHVFAVADVAFRAMINEAKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAGTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHRRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCSAPQEEIEKYKLGPPSSFHYLNQSKCYELVDVSDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIEFAKGKEVDSSVLKDDKAKFHLKTCAELLMCDADALQDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINSSIGQDPSSKCLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKSHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCSFVAGLFPVIQDQSSKSAKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVGVMQQLRCGGVLEAIRISCAGYPTRRTFFEFSNRFGLLAPEAMEGNYDEKVVCQKILEKVGLKGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKTIQRRIRTHQARKHYLALRMVTIFVQSFCRGRLACKLYDNIRREAAAKKIQKNTHRYQARKAYKRLQASALTVQTGLRAIAACKEFRFRKQTKAAIIIQARWRCHRATSYYKRLKKGAIFTQCRWRGRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQLEKSLRTNLEEAKAQEIAKLQNSLQEMQGKLDESNALLIKERENAKKIVEEAPPVIQETQVLVEDTQKIESLTAEVENLKTSLEAEKEKADDFERKYKEAQVYGEERRQKLEDTEKKVQQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSILQRGDSGHIGVEAKPSLDLHSPSMNQRDSSEVDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTVGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGSPAGVNLSLINGSMSGGVQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLALCIQAPRTSRASLVKGSSRSVANTEAQRTLIAHWQGIVKSLGNFLNNLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDINDIEPPPLIRENSGFSFLLPRPD 1525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03388 1525 Gene3D - 734 784 - -
Bva04g03388 1525 Gene3D - 833 882 - -
Bva04g03388 1525 Gene3D - 785 832 - -
Bva04g03388 1525 CDD MYSc_Myo11 76 720 IPR036018 -
Bva04g03388 1525 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Bva04g03388 1525 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Bva04g03388 1525 ProSiteProfiles Dilute domain profile. 1159 1468 IPR002710 -
Bva04g03388 1525 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Bva04g03388 1525 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 SMART iq_5 734 756 IPR000048 GO:0005515
Bva04g03388 1525 SMART iq_5 805 827 IPR000048 GO:0005515
Bva04g03388 1525 SMART iq_5 830 852 IPR000048 GO:0005515
Bva04g03388 1525 SMART iq_5 853 875 IPR000048 GO:0005515
Bva04g03388 1525 SMART iq_5 757 779 IPR000048 GO:0005515
Bva04g03388 1525 SMART iq_5 782 804 IPR000048 GO:0005515
Bva04g03388 1525 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Bva04g03388 1525 PANTHER MYOSIN 7 1522 - -
Bva04g03388 1525 Pfam Myosin N-terminal SH3-like domain 10 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 Gene3D - 439 623 - -
Bva04g03388 1525 PANTHER MYOSIN-9 7 1522 - -
Bva04g03388 1525 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Bva04g03388 1525 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Bva04g03388 1525 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Bva04g03388 1525 Pfam IQ calmodulin-binding motif 832 852 IPR000048 GO:0005515
Bva04g03388 1525 CDD MyosinXI_CBD 1110 1491 IPR037975 GO:0007015
Bva04g03388 1525 Coils Coil 968 1051 - -
Bva04g03388 1525 ProSiteProfiles IQ motif profile. 735 762 IPR000048 GO:0005515
Bva04g03388 1525 MobiDBLite consensus disorder prediction 1095 1110 - -
Bva04g03388 1525 Gene3D Kinesin motor domain 65 662 IPR036961 -
Bva04g03388 1525 Gene3D - 667 733 - -
Bva04g03388 1525 Coils Coil 877 950 - -
Bva04g03388 1525 Pfam DIL domain 1344 1447 IPR002710 -
Bva04g03388 1525 SMART DIL_2 1343 1450 IPR002710 -
Bva04g03388 1525 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Bva04g03388 1525 MobiDBLite consensus disorder prediction 1072 1111 - -
Bva04g03388 1525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 785 IPR027417 -
Bva04g03388 1525 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva04g03388 1525 Gene3D - 252 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03388 Bva-Chr4 27011925 27024370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03388 1 1525 Myosins gene family AT1G54560 84.010 0.0 2709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03388 K10357 - gmx:100816792 2722.58