Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva04g03386 | ATGTCGAGGCAGCAGGTCAAAGTAAAGAGGGAGACGCTAGAAGCATGCACGACATGCCCTCTTTGTCATAAGCTCTTCAAGGATGCCACTACCATGTCTCTCTGCCTTCGTAACTTTTGCAGGAAGTGCATATACGAGAAACTATCAGATGATGAGACGGACTCTTGTCCTGTATGCAATATTGATCTAGGCTGTGTTCCTGTGGATAGGAGGACCCGAGAGTGTGCCACTGAAGTTGCACGCAAAGCTATTAATTCTCTAGAAGGTGCTCGTGTATTTGCAGTTGAATTGTTCTTGGCAAAGGATGGGCAGattttattaaatgaagtaGCACCTAGCGCCTTAACAGATTTTTTGACAGGGAGAGGTTG | 371 | 0.4474 | MSRQQVKVKRETLEACTTCPLCHKLFKDATTMSLCLRNFCRKCIYEKLSDDETDSCPVCNIDLGCVPVDRRTRECATEVARKAINSLEGARVFAVELFLAKDGQILLNEVAPSALTDFLTGRG | 123 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva04g03386 | 123 | ProSiteProfiles | Zinc finger RING-type profile. | 19 | 60 | IPR001841 | - | |
Bva04g03386 | 123 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 4 | 60 | IPR013083 | - | |
Bva04g03386 | 123 | SUPERFAMILY | Glutathione synthetase ATP-binding domain-like | 66 | 113 | - | - | |
Bva04g03386 | 123 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 1 | 70 | IPR044807 | GO:0004842 | |
Bva04g03386 | 123 | Pfam | ATP-grasp domain | 58 | 112 | IPR003135 | - | |
Bva04g03386 | 123 | Gene3D | - | 72 | 112 | - | - | |
Bva04g03386 | 123 | SUPERFAMILY | RING/U-box | 13 | 63 | - | - | |
Bva04g03386 | 123 | PANTHER | UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED | 1 | 70 | - | - | |
Bva04g03386 | 123 | Pfam | Zinc finger, C3HC4 type (RING finger) | 19 | 59 | - | - | |
Bva04g03386 | 123 | SMART | ring_2 | 19 | 59 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva04g03386 | Bva-Chr4 | 27006425 | 27008418 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva04g03386 | 6 | 70 | C3H Transcription Factor Family | AT2G30580 | 66.154 | 1.27e-26 | 99.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva04g03386 | K16277 | - | mnt:21389216 | 128.257 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva13g03447 | 13 | 23530117 | 23535478 | Bva04g03386 | 04 | 27006425 | 27008418 | ECH | |
Bva04g02825 | 04 | 24247344 | 24253110 | Bva04g03386 | 04 | 27006425 | 27008418 | ECH | |
Bva13g02748 | 13 | 20134139 | 20140684 | Bva04g03386 | 04 | 27006425 | 27008418 | ECH | |
Bva04g03386 | 04 | 27006425 | 27008418 | Bva04g03386 | 04 | 27006425 | 27008418 | ECH |