Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03383 ATGGCTGGAAATTCATCATCGGAGGGATTGGGAGACGATTTCTTCGAGCAGATGTTGGCCGTGCCGTCAGCCTATACCAACAGTGAGTATGGGAGGACAGCGGCTGAGATGGGCTCCATGCCAATGGTGTTGCAGTTGGGTTCTAGTAGAGGCGGCGGGGGCGGTGATGGGTCTGTTGGTGGGTTGAGAGGGTCCTTGGGGGTCGAGATAGGTATGGGTATGCCTTTGGGGCTGAACTTAGAACAAGGGTTTCTTAGACAAGAGGAAGGGAGTGGCCGTGCTAGACGCTTCATTGACGATGTCGGTGAGGGCAATCACAACCATCACCTCCATCCTAATAATGCCATCACTAGTACTacttcatcttcctcttcaaCTTCTGGGATCACTGAAAGGGATTCGGTGCATATGACGGGTTTGTTTTCGGCGTTTGGACAATTGCACGCCCAGTCACTCCGGCCGGCGGTGCCATCTTCATCTGCACCACCCCAGCTTCGCCAGCCCTTTCAGAGCCAACCGCCAAATCCTGTCTCTGCTGTTGCTGTGCCACACCCACCTATCCTCCGCCCCCGAGTAAGAGCAAGAAGAGGGCAAGCCACCGATCCACATAGCATTGCCGAGCGGTTACGTCGTGAAAGAATTGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCTACCGCTAATAAGACAGATAGAGCAGCAATGCTTGACGAAATTGTGGATTATGTGAAGTTCCTCAGACTCCAGGTTAAGGTCCTGAGCATGAGTAGACTTGGTGGAGCTGGTGCAGTTGCTCAGCTTGTTGCTGATGTTCCCCTATCCGCAGTGGAGGGTGAAGGCATTGAAGGCGGAGTCGATCAGCAAGCATGGGAGAAGTGGTCCAATGATGGCACAGAACAACAAGTTGCAAAACTAATGGATGAGGATGTTGGAGCTGCTATGCAATTTCTTCAGTCCAAGGCGCTTTGCATCATGCCTATATCCCTAGCCTCTGCAATTTTTCGTGCTCCACAGTCAGATGCTCCGACAATCATCAAGCCTGAATCAAACAGTCATTCATA 1064 0.5075 MAGNSSSEGLGDDFFEQMLAVPSAYTNSEYGRTAAEMGSMPMVLQLGSSRGGGGGDGSVGGLRGSLGVEIGMGMPLGLNLEQGFLRQEEGSGRARRFIDDVGEGNHNHHLHPNNAITSTTSSSSSTSGITERDSVHMTGLFSAFGQLHAQSLRPAVPSSSAPPQLRQPFQSQPPNPVSAVAVPHPPILRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAVEGEGIEGGVDQQAWEKWSNDGTEQQVAKLMDEDVGAAMQFLQSKALCIMPISLASAIFRAPQSDAPTIIKPESNSHS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03383 354 MobiDBLite consensus disorder prediction 104 131 - -
Bva04g03383 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 257 IPR036638 GO:0046983
Bva04g03383 354 SMART finulus 204 253 IPR011598 GO:0046983
Bva04g03383 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 247 IPR011598 GO:0046983
Bva04g03383 354 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 8 341 - -
Bva04g03383 354 MobiDBLite consensus disorder prediction 110 131 - -
Bva04g03383 354 Gene3D - 193 255 IPR036638 GO:0046983
Bva04g03383 354 MobiDBLite consensus disorder prediction 152 176 - -
Bva04g03383 354 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 341 - -
Bva04g03383 354 Pfam Helix-loop-helix DNA-binding domain 203 247 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03383 Bva-Chr4 26985449 26990457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03383 74 351 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 56.491 7.29e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva04g03383 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03383 - - qsu:112018850 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03440 13 23499587 23502619 Bva04g03383 04 26985449 26990457 ECH
Bva04g02836 04 24298452 24302990 Bva04g03383 04 26985449 26990457 ECH
Bva04g03383 04 26985449 26990457 Bva04g03383 04 26985449 26990457 ECH