Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03381 ATGGATAGGGTGTTTTCGGTGGATGAAATATCGGAGCAGTTTTGGTCGCCACCTGTGGCTATTCCCGCCACCGCAAGAGATGAATCTTGTAAGATGAACCGAAGCGCTTCCGAGTGGGCTTTCCAGCGATTTCTCCAGGAAGCTTCGGCAgcatccgaaacttctccacctTCATCGTCTTCAGCTGCCGACAGAAAAGACGACGTTCCCGTTGAGATCAAGGAACAACCTAAACAGGATCAGACCCAGCTTATCAAATCCACGTCGTTTCAGAAGAATGGTGCGGTCCTCGGCGATGCCCCTCCTCCTAATGTTTCGGTCAATTCCGAGGAGTATCAGGCTCTCCTAAAGACGAAACTCAATCTGGCTTGTGCTGCGGTGGCCCTGACTCggGGATCTTTGGTCAAATCTCAAGATTCGGCCACTTCTGTCGACAGTGAATCTCAGGCTTCTAAAGTTCAAGTTGGATCTCTGGCTACTTTTAAAGgGTCTGGTCCATCTGGAAATAATTCATCCATAACACAAGATAATGATGCCAAAGGACCAGTTGGTATTCCTTCCTTACCTGCCATACAAAACAAACCTGTAGTTGCTGCCAGGCCAACAACAAGTGGATCATCCAGAGAACTGTCAGATGATGACGAAGCTGAGGAAGAGACTGAAATGACTGAAAATATGGACCCTGCTGATGCAAAACGTGTAAGGAGgATGCTTTCAAATAGGGAGTCTGCCAGACGCTcaaggagaagaaaacaagCCCATTTATCCGAACTTGAGACTCAGGTTTCTCAAATAAGGGTTGAAAATTCTTCCTTGTTAAAGCGCCTTGCTGACATAAGCCAGAAGTATAATGAATCTGCTGTTGATAACAGAGTACTAAAAGCTGACGTTGAAACATTAAGAGCCAAGGTGAAAATGGCTGAAGAGACTGTCAAAAGAATTACGGGACTGAATCCCATGCTATATGCCATGTCCGAGATATCGTCAATGGGCATGCCATCATTTGATGGAAACCCTTCTGACACATCGGCTGATGCGGCTGTTCCCGTGCAAGATGACCCCGCTCATCATTTGTATCAACCCACTTCTAATGGTAATAACCCCATCTCCGGTCATGATCTGAGAGTAAACAATGCACTGGGGGACATTTCTTCCATTGAAAATGTTCAGCAAAACGCTGCAGCTGTGGTAGGTGGAAACAAGGTAGGGCGAACAGCTTCCATGCAGCGCGTGGCAAGCTTGGAACATCTGCAGAAGCGGATCCGTGGTGGTGGACCACCATCTAATGGGGAGCAGTA 1298 0.4576 MDRVFSVDEISEQFWSPPVAIPATARDESCKMNRSASEWAFQRFLQEASAASETSPPSSSSAADRKDDVPVEIKEQPKQDQTQLIKSTSFQKNGAVLGDAPPPNVSVNSEEYQALLKTKLNLACAAVALTRGSLVKSQDSATSVDSESQASKVQVGSLATFKGSGPSGNNSSITQDNDAKGPVGIPSLPAIQNKPVVAARPTTSGSSRELSDDDEAEEETEMTENMDPADAKRVRRMLSNRESARRSRRRKQAHLSELETQVSQIRVENSSLLKRLADISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMLYAMSEISSMGMPSFDGNPSDTSADAAVPVQDDPAHHLYQPTSNGNNPISGHDLRVNNALGDISSIENVQQNAAAVVGGNKVGRTASMQRVASLEHLQKRIRGGGPPSNGEQ 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03381 432 PANTHER BASIC LEUCINE ZIPPER 63 1 417 - -
Bva04g03381 432 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 235 250 IPR004827 GO:0003700|GO:0006355
Bva04g03381 432 MobiDBLite consensus disorder prediction 159 226 - -
Bva04g03381 432 Pfam Basic leucine-zipper C terminal 299 424 IPR020983 -
Bva04g03381 432 SUPERFAMILY Leucine zipper domain 232 282 IPR046347 GO:0003700|GO:0006355
Bva04g03381 432 SMART brlzneu 228 292 IPR004827 GO:0003700|GO:0006355
Bva04g03381 432 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 230 285 IPR004827 GO:0003700|GO:0006355
Bva04g03381 432 Coils Coil 290 310 - -
Bva04g03381 432 Coils Coil 241 275 - -
Bva04g03381 432 Pfam bZIP transcription factor 231 284 IPR004827 GO:0003700|GO:0006355
Bva04g03381 432 MobiDBLite consensus disorder prediction 159 178 - -
Bva04g03381 432 Gene3D - 231 287 - -
Bva04g03381 432 MobiDBLite consensus disorder prediction 47 62 - -
Bva04g03381 432 MobiDBLite consensus disorder prediction 76 94 - -
Bva04g03381 432 MobiDBLite consensus disorder prediction 47 106 - -
Bva04g03381 432 PANTHER BZIP TRANSCRIPTION FACTOR 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03381 Bva-Chr4 26977655 26981721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03381 1 367 bZIP Transcription Factor Family AT4G02640 40.260 1.15e-51 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva04g03381 bZIP_C 1.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03381 K25784 - gmx:100170702 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03381 04 26977655 26981721 Bva04g03381 04 26977655 26981721 ECH