Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03373 ATGTTCGATGGAGAGCAGTTCCACCAATTCATAGCTCCAAGAACCTCATTCCCTCTCCACGCCGCCTCTGCAACTAATTTCCCACCTCCTTTGGATCCTTATaacctttctctttctcatctCCAACCCGGTCTCTTGCACCACCATTCTCCAACCCACAAGGAAGATAATAGGTCTGCTACTGCTACTGCTGTGTCTATGAACTTCCACAAACAAGTACGTAATGAGCACAACCTGACTGCTGATAACTCGTGGACTAATGATGAAGTGCTTGCGCTCTTGAAGATCAGATCTACCATGGAAACTTGGTTCCCAGACCTCACATGGGAACATGTCTCAAGGAAGCTAGCAGAGCTTGGATTTAAGAGGAGTGCAGATAGGTGCAAGGAGAAGTTTGAAGAAGAGAGTAGGTACTTCAACAACAACATTAATTACACCAAGAATTACCGCTTTCTAAGCGAGTTTGAGGAGCTTTATCAAAGTGATCATCACCAAAACGCTCCAGTTGAGGAGGttgggaaagaaaagatagaTCGGCTGCTGATGGAAAAGCCAACCCAGCAGGTTGAGGGACAAGACAAGAATATGGACCACATGGAGGATTCGAGAAATGGGAAACAACATTTTGACACtgataaaacagaaaaagttaCTGTGGAAAAATCAAAGGACGGGAAGAGAAAGAGGCACGACAAGTTTGAGATGTTCAAGGATTTATGTGAGAATATTGTCAACCAGATGATGGCTCAACAAGAAGAGATGCACAATAAGCTGCTTCGAGACATGCTCAAAAGGGACGAAGACAAGTTTGCAAGAGAGGAAGCTTGGAAGAAGCGAGATATGGATATGATGAACAAGGAGCTTGACATGATGGCACAGGAGCAAGCCGTTGCCGGTGATAGGCAAGCCGCGATTATAGAATTCTTGAAGAAATTCGCAGCAGGTTCTCCAATTGCCGTTGGCtcccaaagagaaaaaggtaATAATCTCACGGTGACAAACACCTCAAATATTAATCCAACGACTCCCATTACTTCTTTCCAACTGCATCCGCAAAACCCTAGCAGGAAAAAGGATCTTGGCTCACCACCTTTTTCTACTATGATTCCAAATCATCAGAATATCACGTGCAGTGCAGAAAACCCTAGTTCGAGCCTTTTTCCAGAAACTATAGAAGTGGCAGCGTCTTCATCTACTTCAACGCCAACACCTCCCCAGAATAACCCGCTAGCAACCACTTCAGCTTCAACACATAGAGCGTCGTCCGCCGAGAAAGAAGATGTAGGGAGAAGATGGCCAAGAGATGAAGTGATGGCACTAATAAACCTCAGGAGCTGTCTGAATAACAGTGGCGAAGACGGAAGCAATAAGGCTCCTTTATGGGAGAGAATGTCTCAAGGGATGTTGGAGTTGGGATACAAGAGAAGTGCAAAGAGgtgcaaagaaaaatgggaGAATATAAACAAGTACTTCAGAAAAACAAAGGATAATGTTAATAAGAAGAGGTCCCTTGATTCTAGGACTTGCCCCTATTTCCATCAACTGAGTACTTTGTATGGTCAAGGAAAACTTGTTTCGCAATCTGAGAGGATAGATCAAAATCACTTGAATCCATCACCAACAAATCAAGGGCAAGTGCATACGGACGGAGGTGAGAAAACTTTGATGCAGGGACCTGCAGCGTTAGATTTTGAATTCTA 1700 0.4212 MFDGEQFHQFIAPRTSFPLHAASATNFPPPLDPYNLSLSHLQPGLLHHHSPTHKEDNRSATATAVSMNFHKQVRNEHNLTADNSWTNDEVLALLKIRSTMETWFPDLTWEHVSRKLAELGFKRSADRCKEKFEEESRYFNNNINYTKNYRFLSEFEELYQSDHHQNAPVEEVGKEKIDRLLMEKPTQQVEGQDKNMDHMEDSRNGKQHFDTDKTEKVTVEKSKDGKRKRHDKFEMFKDLCENIVNQMMAQQEEMHNKLLRDMLKRDEDKFAREEAWKKRDMDMMNKELDMMAQEQAVAGDRQAAIIEFLKKFAAGSPIAVGSQREKGNNLTVTNTSNINPTTPITSFQLHPQNPSRKKDLGSPPFSTMIPNHQNITCSAENPSSSLFPETIEVAASSSTSTPTPPQNNPLATTSASTHRASSAEKEDVGRRWPRDEVMALINLRSCLNNSGEDGSNKAPLWERMSQGMLELGYKRSAKRCKEKWENINKYFRKTKDNVNKKRSLDSRTCPYFHQLSTLYGQGKLVSQSERIDQNHLNPSPTNQGQVHTDGGEKTLMQGPAALDFEF 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03373 566 PANTHER - 14 550 - -
Bva04g03373 566 CDD GT1 430 495 - -
Bva04g03373 566 MobiDBLite consensus disorder prediction 331 363 - -
Bva04g03373 566 ProSiteProfiles Myb-like domain profile. 431 488 IPR001005 -
Bva04g03373 566 MobiDBLite consensus disorder prediction 533 554 - -
Bva04g03373 566 MobiDBLite consensus disorder prediction 190 228 - -
Bva04g03373 566 MobiDBLite consensus disorder prediction 331 355 - -
Bva04g03373 566 ProSiteProfiles Myb-like domain profile. 83 136 IPR001005 -
Bva04g03373 566 MobiDBLite consensus disorder prediction 187 228 - -
Bva04g03373 566 MobiDBLite consensus disorder prediction 394 431 - -
Bva04g03373 566 SMART sant 428 490 IPR001005 -
Bva04g03373 566 SMART sant 81 138 IPR001005 -
Bva04g03373 566 Pfam Myb/SANT-like DNA-binding domain 430 517 IPR044822 -
Bva04g03373 566 Pfam Myb/SANT-like DNA-binding domain 83 144 IPR044822 -
Bva04g03373 566 Gene3D - 85 141 - -
Bva04g03373 566 Gene3D - 432 493 - -
Bva04g03373 566 MobiDBLite consensus disorder prediction 533 550 - -
Bva04g03373 566 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 14 550 - -
Bva04g03373 566 MobiDBLite consensus disorder prediction 394 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03373 Bva-Chr4 26941401 26943723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03373 1 521 Trihelix Transcription Factor Family AT5G28300 38.693 5.03e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva04g03373 Myb_DNA-bind_4 2.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03373 - - qsu:112024754 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03373 04 26941401 26943723 Bva04g03373 04 26941401 26943723 ECH