Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03372 ATGGCGGATTCAACCAAGGGAAGCGACCAGAAGACGCGGGTTTATCATCCGTATCAGGACCTTAACGTTCCAATCCAGAAGCTTTACGAGTTGCCCACGACCCCCGAACTCCTCTTTGCCGAAGAGGCAGCCAAACGCCACCGCTCGTGGGGCGAAAATCTCCAGTACTACGCTGGCTGCGGCTACTTGTCCGGCGCAATTTTGGGTGGCGCTAAGGGCACCGTCGAAGGCGTCAAGGCTGCTGAGGCCGGTGACTCCCTCAAGCTCCGGATCAACCGTGTTCTGAATTCCGGGGGTCAAACTGGGCGCAGATTTGGGAATTCAATGGGTGTGTTGGGCTTGATCTATGCTGGTTTAGAGAGTGGGATTACTCACTGGAGGGGAACCGATGATTTATTGAACAGTGTCGTCGCCGGACTTGGAACCGGTGCGCTTTACAGGGCAGCAGCGGGGCCGCGATCAGCTGCTATTGCGGGTGCCATAGGTGGAATcacggcggcggcggcggttGCGGGTAAGCAAGCCTTGAAAAGATATGTTCCAATATA 548 0.5347 MADSTKGSDQKTRVYHPYQDLNVPIQKLYELPTTPELLFAEEAAKRHRSWGENLQYYAGCGYLSGAILGGAKGTVEGVKAAEAGDSLKLRINRVLNSGGQTGRRFGNSMGVLGLIYAGLESGITHWRGTDDLLNSVVAGLGTGALYRAAAGPRSAAIAGAIGGITAAAAVAGKQALKRYVPI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03372 182 Pfam Tim17/Tim22/Tim23/Pmp24 family 56 164 - -
Bva04g03372 182 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 5 182 - -
Bva04g03372 182 PANTHER TIM23 5 182 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03372 Bva-Chr4 26939021 26939853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03372 4 182 Chloroplast and Mitochondria Gene Families AT1G72750 59.890 1.04e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03372 K17794 - vvi:100255976 262.307