Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03355 ATGAAgaacattttcaaaaaactTCACAAAGGGAGCAATCACGACCCTAATCGATCGAATGAAACCCCAGCCTCTGTAGGATCACCATCTTGCAGCTCCGATAATCGCACATCTCCAGTTCAGAACTCCACCACGCCTCTCGTTAGTCCGCCATCATCGTCGCCGTCTTCAGCGACTGTGTCAACTGGTGGCGCTTCCAACACGGCACCTGCTACAGTCAATCGACAAGACTATTTTTCGTCAGAGGAGGAGTTTCAGGTTCAGCTAGCCCTAGCTATCAGCGCTTCTAATTCGGAATTCCGGGAAGATCCTGATAAGGACCAGATCCGAGCGGCAACGCTTCTGAGCTTGGGAGGTCATCGAATCGATTCCTCAAGGAGTAAGGACGAAGCAGCGGAGGCGCTGTCTAGGCAATACTGGGAATACAGTGTGCTTGATTACGAGGAGAAAGTACTGGATGGTTTTTATGATGTATATGGGCTCTCTACTGATTCAGCAATGCAAGGAAAGATGCCCTCTCTAACTGATCTTGAAGCTAACCCTGGAAATtccaactttgaagttgtaaTAGTTAATCGGACCATTGATCCTGCCCTGGAAGAATTGGTGCAAGTGGCACACTGTATTGCTTTAGACTGCCCTGTCACTGAAGTTGCTGTTCGGGTGCAAAGGCTTGCTGAACTTGTTACAGGGCATATGGGTGGTCCTGTAAAGGAtgctaatattatattaacaagATGGACGGAAAGAAGTACAGAGCTAAGGACATCTCTTCACACAAGTGTGTTACCTCTTGGGTCCATAAACATTGGCCTCTCTAGACACCGTGCTTTGCTTTTCAAGATATTAGCTGACAGTATCAAGATGCCTTGTAGACTGGTAAAAGGCAGTCATTACACTGGCGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAAGATGAAAGGGAGTTTTTGGTGGATCTCATGGCTGCTCCTGGAACACTTATCCCAGCTGATATTTTAAGTGCGAGGGATACTGCCCTTAAATCATACAATCCTATGATTTTACCAAGTTTGCAATCGGCTAGGGAAACTGGATATTCTTACTCAAGACCAATGGAATCTCATGGTGAAGGTAGTAGTAAAAATTCTGGGATAAAAGGTGGTTTGCCGCTGTCAAATGGAAAATCATATTTTGAGAATTCAGGGTACCTGTCTTCAAACTTGAGTTCAAGTACTAACACTGGTATTGGTCCTTCTAAAATACCAAACAAAGTGACTCCTAGTCAATTGGAAAATATGCCCCTTTTAGCTGGTCCTTCCTTGTACAAAGGGACTTGTGGAATGAATGCAGTTGGTGATGGGACAAGACTGAATGTAAATGTTGTACCTTATGGTGAGAATAGCCCAGATGACTCTAGGAATCTTTTTGCAGATCTTAACCCATTTCAGATAAAAGGAACTGGTAAGACTTCTCTGCTTGATAAACCTGTGGAAAATAAAGCTCCTGAGCTTCAGAGTACAAGAAACAATACTGTTTCTGGTCGACCCCCAGTACCATTGATGTGGAAGAACCGTTATGCTTACAATGAAGTCCCCAGGAAAATTAATTGCGATCCAAATGAATACAACCAGTCTTTGTTGGCTTCCAATAATTCTTCGACATCTGAAAAGATGGAGTTAAATGGTTCCATATCATCATACAATCCAAATATAAGTAGAGAATCTAGAGATAGAGATACTCAAAATTTGACACAAGCTACTAGTTCAATATCAGGGTCTGGTGCAGATGTGTTGAACAGGGTTGAGGATCTGAATGCTAATTGTAAAAATGGGAAtacagaaaatttgcaaagtgACATGGTTGATGTGGTTAAAGAAcatgaaaacaatgaaattggATTTCTTGATCAGATAAAGTGCATGCATGATAGATTCTTGGGAagcaatttgaaattaaaagatcCGGAGAGTCCTAGCTCATCAATTGATTCTAATACAAATAGGGTTGATCAAATATTTGACGATGTAGATGTTGGTGAATGTGAAATTCCATGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTTTACCATGCTGACTGGAATGGCACAGAGGTCGCTGTGAAGAAATTCTTGGATCAGGATTTCTCAGGTGCTGCCTTGGCTGAATTCAAACGAGAAGTAAGGATAATGCGTAGACTGCGCCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCTAATCTCTCAATCATTACAGAGTTTCTTCCAAGAGGTAGCTTGTACAGAATTCTTCATCGTTCTAATTGCCAGATTGATGAGAAACGTAGAATAAGAATGGCTCTGGATGTGGCAAGGGGTATGAGTTGCTTACACACCAGCACACCCACTATTGTTCACCGAGACCTAAAGTCACCAAATCTGTTGGTTGATAAGAACTGGAATGTGAAGGTATGTGATTTTGGGTTGTCACGCTTGAAGCACAACACATTTTTGTCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCACCTGAAGTTCTCCGCAATGAGCCGTCGAATGAAAAGTGTGATGTATATAGTTTTGGAGTGATTCTATGGGAGCTTGCTACTCTAAAGTTGCCATGGAGTGGAATGAATCCTATGCAAGTGGTTGGCGCAGTAGGCTTCCAAAATCGTCGCCTTGATATCCCGAAGGATGTTGATCCTGTTGTTGCAAGAATAATTTGGGAGTGTTGGCAAACAGATCCAAACTTGCGGCCCTCATTTGCACAGCTCACGGTGGCTCTAAAGCCCTTGCAGCATCTTGTTATCCCATCTCATCAAGACCAGCTGGTTTCTCCTCTGCCGCAGGAGATTTCTGTAAATTCCACCCCCTA 2894 0.4185 MKNIFKKLHKGSNHDPNRSNETPASVGSPSCSSDNRTSPVQNSTTPLVSPPSSSPSSATVSTGGASNTAPATVNRQDYFSSEEEFQVQLALAISASNSEFREDPDKDQIRAATLLSLGGHRIDSSRSKDEAAEALSRQYWEYSVLDYEEKVLDGFYDVYGLSTDSAMQGKMPSLTDLEANPGNSNFEVVIVNRTIDPALEELVQVAHCIALDCPVTEVAVRVQRLAELVTGHMGGPVKDANIILTRWTERSTELRTSLHTSVLPLGSINIGLSRHRALLFKILADSIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILSARDTALKSYNPMILPSLQSARETGYSYSRPMESHGEGSSKNSGIKGGLPLSNGKSYFENSGYLSSNLSSSTNTGIGPSKIPNKVTPSQLENMPLLAGPSLYKGTCGMNAVGDGTRLNVNVVPYGENSPDDSRNLFADLNPFQIKGTGKTSLLDKPVENKAPELQSTRNNTVSGRPPVPLMWKNRYAYNEVPRKINCDPNEYNQSLLASNNSSTSEKMELNGSISSYNPNISRESRDRDTQNLTQATSSISGSGADVLNRVEDLNANCKNGNTENLQSDMVDVVKEHENNEIGFLDQIKCMHDRFLGSNLKLKDPESPSSSIDSNTNRVDQIFDDVDVGECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRILHRSNCQIDEKRRIRMALDVARGMSCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWSGMNPMQVVGAVGFQNRRLDIPKDVDPVVARIIWECWQTDPNLRPSFAQLTVALKPLQHLVIPSHQDQLVSPLPQEISVNSTP 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03355 964 MobiDBLite consensus disorder prediction 546 574 - -
Bva04g03355 964 SUPERFAMILY Protein kinase-like (PK-like) 673 955 IPR011009 -
Bva04g03355 964 MobiDBLite consensus disorder prediction 546 566 - -
Bva04g03355 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Bva04g03355 964 MobiDBLite consensus disorder prediction 17 71 - -
Bva04g03355 964 PANTHER SERINE-THREONINE PROTEIN KINASE 70 956 - -
Bva04g03355 964 ProSiteProfiles Protein kinase domain profile. 683 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03355 964 CDD STKc_MAP3K-like 689 932 - -
Bva04g03355 964 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 70 956 - -
Bva04g03355 964 MobiDBLite consensus disorder prediction 482 511 - -
Bva04g03355 964 PRINTS Tyrosine kinase catalytic domain signature 843 853 IPR001245 GO:0004672|GO:0006468
Bva04g03355 964 PRINTS Tyrosine kinase catalytic domain signature 757 770 IPR001245 GO:0004672|GO:0006468
Bva04g03355 964 PRINTS Tyrosine kinase catalytic domain signature 796 814 IPR001245 GO:0004672|GO:0006468
Bva04g03355 964 PRINTS Tyrosine kinase catalytic domain signature 906 928 IPR001245 GO:0004672|GO:0006468
Bva04g03355 964 PRINTS Tyrosine kinase catalytic domain signature 862 884 IPR001245 GO:0004672|GO:0006468
Bva04g03355 964 Pfam Ethylene-responsive protein kinase Le-CTR1 132 330 - -
Bva04g03355 964 SMART serkin_6 683 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03355 964 MobiDBLite consensus disorder prediction 1 71 - -
Bva04g03355 964 ProSitePatterns Protein kinases ATP-binding region signature. 689 711 IPR017441 GO:0005524
Bva04g03355 964 MobiDBLite consensus disorder prediction 403 422 - -
Bva04g03355 964 Pfam Protein tyrosine and serine/threonine kinase 684 933 IPR001245 GO:0004672|GO:0006468
Bva04g03355 964 Gene3D Transferase(Phosphotransferase) domain 1 762 944 - -
Bva04g03355 964 Gene3D Phosphorylase Kinase; domain 1 676 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03355 Bva-Chr4 26842144 26849781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03355 1 920 MAP Kinase Kinase Kinase AT1G08720 56.635 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva04g03355 PK_Tyr_Ser-Thr 1.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03355 - - aprc:113870732 1474.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03355 04 26842144 26849781 Bva04g03355 04 26842144 26849781 ECH