Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03348 ATGGCTTTTGAATTAAGCCATGtatttgcaaaatttcaaatggTAGGCACCTCCGACCATGCCTCCGTGGTCTCtatgaatatatttgttgCACTCCTTTGTGCTTGTATTGTGATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAATCTATCACTGCCCTGTTGATTGGTCTTTGCGTTGGTGTAGTAATTTTGCTGGTCAGTGGGGGTAGAAGCTCGCATCTTCTTGTCTTCAGTGAagatcttttctttatatatcttCTGCCACCTATCATATTTAATGCCGGGTTTCAGGtgaaaaagaagcaattttTCGTTAACTTCATCACTATCACGCTGTTTGGTGCTGTTGGTACATTGATATCTTGTGGCATCATAACTTTGGGTGCTACCCAAGCTTTTAAAAGGATGGATATTGGTCCAATGGAAATTGGAGATTTTCTAGCCATTGGTGCTATATTTGCTGCAACAGATTCTGTGTGCACATTGCAGGTGCTAAATCAAGATGAGACACCTTTACTCTACAGTCTTGTATTTGGGGAGGGTGTTGTAAATGATGCTACATCAGTGGTGCTTTTCAATGCAATAAAAAGCTTTGACCTCAACCAACTTGATCCAACAATTGCTTTGCATTTCCTTGGAAACTTCTTATATTTGTTCATCGCAAGCACACTGCTTGGAGTTTTGACGGGTCTGCTTAGTGCATATATAATCAAGAAGCTGTATATTGGCAGGCATTCAACGGATCGCGAAGTTGCTCTTATGATGTTAATGGCCTACCTTTCGTACATGCTGGCTGAATTATGCTATCTTAGTGGCATTCTCACTGTATTCTTTTGTGGCATTGTGATGTCTCACTACACTTGGCATAATGTGACTGAAAGTTCACGGATAACTACCAAGCACACTTTTGCAACCTTGTCATTTGTTGCTGAGATCTTTATCTTCCTTTATGTCGGTATGGATGCCTTGGACATAGAAAAGTGGAGATTTGTGAGCGATAGTCCCGGAACATCAGTAGCAGTGAGTTCCATATTGTTAGGTCTAGTTCTTGCTGGAAGAGCAGCTTTCGTTTTTCCTTTGTCCTTCTTGTCCAATTTGGCTAAAAAGTCACCAGAGGACAAACTCTCCTTCAGGCAGCAAGTGATCATATGGTGGGCTGGTCTTATGAGAGGTGCCGTTTCAATGGCGCTTGCTTATAACAAGTTCACAATGTCAGGGTATACTCAATTGCGGTCCAATGCGATTATGATCACCAGCACGATCACTGTTGTGCTTTTCAGCACAGTGGTGTTTGGTTTGATGACTAAACCTCTGATAAAGCTATTGCTGCCACATACAAAACGCACAAGCAGCACGATTTCGACAGAACCAACTACCCCAAAATCATTCACTGTGCCACTACTTGGAAATGCACAAGAATCTGAAGTTAACCTTCCTGATATTATTCGTCCAAGCAGCATTCGTGCACTATTGGCCACTCCAACACACACTGTTCATCGCTACTGGCGTAAGTTTGATGATGCAATCATGCGACCAGTTTTTGGCGGCCGGGGTTTTGTTCCTGTAGCTCCGGCCTCACCCACCGAACGCAATGGTCATCAGTGGCAAta 1619 0.4169 MAFELSHVFAKFQMVGTSDHASVVSMNIFVALLCACIVIGHLLEENRWMNESITALLIGLCVGVVILLVSGGRSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITITLFGAVGTLISCGIITLGATQAFKRMDIGPMEIGDFLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNQLDPTIALHFLGNFLYLFIASTLLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVSDSPGTSVAVSSILLGLVLAGRAAFVFPLSFLSNLAKKSPEDKLSFRQQVIIWWAGLMRGAVSMALAYNKFTMSGYTQLRSNAIMITSTITVVLFSTVVFGLMTKPLIKLLLPHTKRTSSTISTEPTTPKSFTVPLLGNAQESEVNLPDIIRPSSIRALLATPTHTVHRYWRKFDDAIMRPVFGGRGFVPVAPASPTERNGHQWQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03348 539 Gene3D - 145 197 - -
Bva04g03348 539 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva04g03348 539 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva04g03348 539 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva04g03348 539 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva04g03348 539 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 28 466 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva04g03348 539 PANTHER SODIUM/HYDROGEN EXCHANGER 7 538 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bva04g03348 539 Pfam Sodium/hydrogen exchanger family 28 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva04g03348 539 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03348 Bva-Chr4 26794333 26799851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03348 10 537 Antiporters AT3G05030 78.090 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03348 - - gmx:732573 894.419