Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03342 ATGGAGTGCAACAAGGACGAGGCTGCAAGGGCTAAGCAAATTGCTGAAAATAGGATGCAAAGTGGTGACTTTGCGGGGGCACTGAAGTTTGCTATGAAGGCTCAGAAAATGTTTCCTGAGGTTGAGAACATTGTGCAAATCCATGCTGTTTGCGAGGTTCACTGTGCTGCACAGAACAAACTTTTTGGGTCAGAAATGGATTGGTATGGAATTCTTCAGACTGATCGCTTGGCTGATGAAGCAACTATAAAGAAACAGTACAGGAAACTTGCACTGCTACTTCATcctgataaaaataaattagctgGTGCAGAGGCTGCTTTCAAGTTGATTGGGGAAGCAAATAGGGTGGTGACTGACCAAGCTAAGCGCTCTTTGTATGACATGAAATGTAGGTCCATAATGAGAAATGCAACACCTAAGCCCACATCCCATCACTCAAATGGTAGTGCATTTGCCAAGAAACACGAAGAAACTGCAAGCAGTGTTCAGAGTAATTTTCATTCCCAATCCACTGGTTGGAATTCCTATCGACAGTCTGAACAGCAAACATTCTGGACATGTTGCGAGCATTGTCTTACGTGGTACCAGTACTACAAAACCATTGTGAATGCGACTTTATGTTGTCAACAGTGTTCTAGATCCTTCACTGCGCATGATTTGGGATCTGATTGTGTACCACCAGGATATGCACGGACATCATTTACTAACCAGAAAGCAGCTCCAAAGCAGGCACCACTGAATACAGAGTCACAAAGGGATGGTAGAAAACCTTATAGTGGAAGACATGATAAATTTGTCCGATCTGACCCTGTGTCCACAACAAAATGTGCTACTGGAGTTGGTGGTCCATTTTCATGTGGAAAGAATAAAGACGGTGATATGGCTGCTGGAGGGGTGAAGAGGGGCATTAGATTGTCTAAGCCTGCTGCATTCGGAGCCCGGGAGTCACAAACCTCAGCAAATATTGGCAGTAAGAGAGCTAGGCAGTCAGTGGTGGATCCTCGGGAAAGTTGCAAGACTGGAAGTTTTAAGGACACAGAAAATGCTAATGTCCAAGAGAATGCTGGTAATCCTATTAGAGTTAATCAAAGAATGCACACAAGGAGACATATCAAGCAAAACGAGAGTGCTTCATACACGGGAACTGTAGGTGATGATGATTTTGGGAGTCCTTGTAAAAAACCACAACATGATGGACCATCTGAAGTGGAGACAAAAGAAGTGCTTGCAACCAACAAATATTCAGCTACTTCTGCTGCCGGTTTGAGTTGTCAGAATGgacagataaaaaataaagcaagtGGCCCTCCTGAAGAAACAACtttaaacaagaaaagcaaaattgaGCCGTCTGGGCAGACATTCAAGTCGGATCTTGATGCCAGAGAGTCAAAAGTTGATCATTGTTCATCAAATGTTCCATCAACTTCGAGTCCAGAGTTCATTTATTATCCGGATCCAGATTTCAATGATTTTGAGAAGGATAGGGCAGAGAATTGTTTTGCTGTTAATCAGCTCTGGGCCATTTATGATCCAATAGATGGTATGCCAAGATATTATGCCCGTGTCAGGAAAGTTTTGTCCCCTGGATTCAAGTTGCGCATTACTTGGCTGGAACCTAGTCCGAATGGCCAAGGTGAGATTGGTTTATGCGGAAAACATTTGCCTATTGGTTGTGGTGAGTTCATACTTGGTGAAACCGAGGAAACTGTAGATCATAGTATGTTTTCTCATCAGATGAATTGTGTTAAAAAAGTTGGCAAGCATAAGTATCTGGTATATCCTAGGAAGGGAGAAATTTGGGCTATTTTCAGGGACTGGGATGTGGGATTGAATTCTGATTCAGAAAAGCACTCtagatttgaatttgaatatgtGGAAGTCCTGTCAGATTTTGCTGAGAATGTTGGCATTGAAATTGCTTATCTAGGCAAGGTGAAAGGGTTTGTTAGTGTCTTTCAACAAACTGAACAGATTGGAATTGgcttatattatattccaCTTGATGAGCTATATAGGTTCTCACATCGAATTCCTTCGTTTAAGATGACCGGTGATGAAAAGGAAGGGGTTCCTAGAGGATCATTTGAACTTGATACAGCTGCTTTGTCAAGTAATCTGGCAGAAGTGGGTGGTCCTTGTGATATGAATGTGGAGAATAGAATCCTAAACACTGGAGTCAATAGTTCATGCCATGAATCTTCTGAATGTAAAGCCGAACAGGTGATGGCTAAGGAAAGTTCTCACAAGGCAAAGAAGCAAGAGAGTAATGATGTAACAAAAGTGTTCTCTATCCTTAGAAGATCACCTAGGGGGTTAAACAGAAATAGTATGGATAATGGTAAAGTAAGCCCAAGCGAAACCAGAGAGAATGATAGCAAAGACATAAGTCTTGAGGATGTCGGTCAACCAAAGGGAACTGTTTCTACATGTGACGCTGATAAGAGTATCAAAACACCAAAGAAACATGACAAAAATGAGTGTGAGACGGAGACATTAAAATTACGAAGGTCACCTAGAGATTTAGGCAAAGGAAATGCTAAAATAGATGCAGTTACAGCTGGCGAGGGGACCGATAATCATTCAAATGCCAAGAGACACCCAAAGGACAGTTTTGCTCAGTCAGTAGGAAGTACTTTTAGTTACTCTGgtgaaaaattacatttacgTGTGAAAGACTCCAACACTGCTTCTGCATCTTCGATGAAAGATTGCAAAATTCTGGGAGCATTGTGTCATGACTTCAGCAAGGAAAAATGTGAAGAAAAGTTTCAGCCTGGTCAGATATGGGCCTTACATGGTGATAGCGGTGGGATTCCTGACACTTACGCTCAAATTAACAAGGTTGAATTTGCCCCTCATTTTAGATTGCACGTGGCCTTGCTTGAACCCTGTTCACGACCGAAAGGCGTAAATGGACTAGCATCTTGCGGTACCTTCAGAATAAAAAATGCTGTTACGAAGATCCTCTCCCGCTCTGTTTTCTCTCATCAATTGAGAGTCGAACCCGTGGCGAACAATAGATATGAAATTTACCCAAGGAAAGGTGAGATCTGGGTTGTCCACAAGGACCAGAATTGTGCATCAACTTGTTCAGACTTTGGGAGAGGTGGGTGTCACATTGTGGAAGTATTAGTAGATAGTGACAAGGCCATAGAAGTTGTGGTTCTAGTACAGCTTAGTGATTCTAAGCCATTTTTCAAGGCTCCTAGAATCCAAAGATCCAGGACTGGCGTTATTGAGATACCACGAGCCGAGGTTGCTAGATTCTCTCATCAGATTCCTGCTTTTCAGCACAGTGGGGAAGACAACGTTCATCTCAGGGGCTGTTGGGTGCTCGATCCTTCTTCAATTCCGGGTTTTGTGACACCACTGGATTG 3383 0.4156 MECNKDEAARAKQIAENRMQSGDFAGALKFAMKAQKMFPEVENIVQIHAVCEVHCAAQNKLFGSEMDWYGILQTDRLADEATIKKQYRKLALLLHPDKNKLAGAEAAFKLIGEANRVVTDQAKRSLYDMKCRSIMRNATPKPTSHHSNGSAFAKKHEETASSVQSNFHSQSTGWNSYRQSEQQTFWTCCEHCLTWYQYYKTIVNATLCCQQCSRSFTAHDLGSDCVPPGYARTSFTNQKAAPKQAPLNTESQRDGRKPYSGRHDKFVRSDPVSTTKCATGVGGPFSCGKNKDGDMAAGGVKRGIRLSKPAAFGARESQTSANIGSKRARQSVVDPRESCKTGSFKDTENANVQENAGNPIRVNQRMHTRRHIKQNESASYTGTVGDDDFGSPCKKPQHDGPSEVETKEVLATNKYSATSAAGLSCQNGQIKNKASGPPEETTLNKKSKIEPSGQTFKSDLDARESKVDHCSSNVPSTSSPEFIYYPDPDFNDFEKDRAENCFAVNQLWAIYDPIDGMPRYYARVRKVLSPGFKLRITWLEPSPNGQGEIGLCGKHLPIGCGEFILGETEETVDHSMFSHQMNCVKKVGKHKYLVYPRKGEIWAIFRDWDVGLNSDSEKHSRFEFEYVEVLSDFAENVGIEIAYLGKVKGFVSVFQQTEQIGIGLYYIPLDELYRFSHRIPSFKMTGDEKEGVPRGSFELDTAALSSNLAEVGGPCDMNVENRILNTGVNSSCHESSECKAEQVMAKESSHKAKKQESNDVTKVFSILRRSPRGLNRNSMDNGKVSPSETRENDSKDISLEDVGQPKGTVSTCDADKSIKTPKKHDKNECETETLKLRRSPRDLGKGNAKIDAVTAGEGTDNHSNAKRHPKDSFAQSVGSTFSYSGEKLHLRVKDSNTASASSMKDCKILGALCHDFSKEKCEEKFQPGQIWALHGDSGGIPDTYAQINKVEFAPHFRLHVALLEPCSRPKGVNGLASCGTFRIKNAVTKILSRSVFSHQLRVEPVANNRYEIYPRKGEIWVVHKDQNCASTCSDFGRGGCHIVEVLVDSDKAIEVVVLVQLSDSKPFFKAPRIQRSRTGVIEIPRAEVARFSHQIPAFQHSGEDNVHLRGCWVLDPSSIPGFVTPLD 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03342 1127 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 768 831 - -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 236 254 - -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 391 405 - -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 344 362 - -
Bva04g03342 1127 CDD DnaJ 67 120 IPR001623 -
Bva04g03342 1127 Pfam DnaJ domain 67 128 IPR001623 -
Bva04g03342 1127 PRINTS DnaJ domain signature 87 102 IPR001623 -
Bva04g03342 1127 PRINTS DnaJ domain signature 103 123 IPR001623 -
Bva04g03342 1127 PRINTS DnaJ domain signature 69 87 IPR001623 -
Bva04g03342 1127 Pfam Domain of unknown function (DUF3444) 913 1103 IPR024593 -
Bva04g03342 1127 Pfam Domain of unknown function (DUF3444) 481 688 IPR024593 -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 236 265 - -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 816 831 - -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 428 454 - -
Bva04g03342 1127 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 771 785 - -
Bva04g03342 1127 Gene3D DnaJ domain 64 179 IPR036869 -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 312 405 - -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 313 327 - -
Bva04g03342 1127 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 825 1121 - -
Bva04g03342 1127 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 713 - -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 854 873 - -
Bva04g03342 1127 SMART dnaj_3 66 123 IPR001623 -
Bva04g03342 1127 PANTHER - 825 1121 - -
Bva04g03342 1127 PANTHER - 1 713 - -
Bva04g03342 1127 MobiDBLite consensus disorder prediction 786 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03342 Bva-Chr4 26766789 26771618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03342 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.169 1.89e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03342 - - aprc:113861153 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03342 04 26766789 26771618 Bva04g03342 04 26766789 26771618 ECH