Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03330 ATGGCACTAGAAGCAGTTGTTTATCCACCAGATCCATTTGGCTATGGTGGCAAAGACCTCTTCACCCTGTTAGGAGGAGGAACCAACTGGGTTTACGACGATTTCAACCTtggaaaacaagaagaagatcATGGCACCATTGGTTTTCTCGAGAACCAAACGGAAACCAATTATGCTTATGCAGACTggaattcttcttcttcatcatcaatgTTACCCCACCTGAATGAATTGCATCTCTCCAATCCCAATCTCTCAGAGACTACCACCACTGCCAGCGATCCAACTCCAAGTGAGCCCATCAACTTAGACAGTTCAACTTCCATAGTCGCACGTCCTAAACGACGCCGTGCAAGAAACCGAAagaacaaggaagaaattgagaaCCAGAGAATGACTCACATTGCTGTGGAGCGCAATAGGAGAAAGCAAATGAATGAGTATCTCTCTGTTCTTCGTTCTCTGATGCCAGATTCATACGTCCAAAGGGGTGACCAAGCTTCTATAATTGGAGGTGCTATTAATTTTGTGAAGGAGCTTGAGCAGAGGCTACAATTACTTGGTGCTCAGAAAGAAACCGCGGAGGGGAAATCTAATGGCAGCGCAACCATGCCCTTTTCAGAGTTCTTCACCTTTCCTCAGTATTCAACAAATTCTGTGGCCGTAGGTGAGCAAGTGAGTGCTGAGGCTCAGAGTGATACTGCTGACATAGAAGTGACAATGGTGGAGAGCCATGCGAATCTCAAAATAAGATCAAAAAAGCGACCAAAGCAGCTCTTAAAGATGGTCTCTTGTTTACATACCATGCGTCTCACAATCTTGCACCTAAATATCACAACCACTGCTGATATTGTCCTCTATTCTCTCAGTGTAAAGGTAGAAGATGACTGCAAGCTGAATTCAGTGGATGAGATAGCAACAGCTGTATACCATATGCTGGGCAGGATTCAACAAGAGGCAATGTTgaatta 971 0.4181 MALEAVVYPPDPFGYGGKDLFTLLGGGTNWVYDDFNLGKQEEDHGTIGFLENQTETNYAYADWNSSSSSSMLPHLNELHLSNPNLSETTTTASDPTPSEPINLDSSTSIVARPKRRRARNRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQLLGAQKETAEGKSNGSATMPFSEFFTFPQYSTNSVAVGEQVSAEAQSDTADIEVTMVESHANLKIRSKKRPKQLLKMVSCLHTMRLTILHLNITTTADIVLYSLSVKVEDDCKLNSVDEIATAVYHMLGRIQQEAMLN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03330 323 PANTHER MAX DIMERIZATION, MAD 1 323 - -
Bva04g03330 323 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 323 - -
Bva04g03330 323 MobiDBLite consensus disorder prediction 80 106 - -
Bva04g03330 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 180 IPR011598 GO:0046983
Bva04g03330 323 CDD bHLH_AtFAMA_like 132 205 - -
Bva04g03330 323 Pfam Helix-loop-helix DNA-binding domain 130 181 IPR011598 GO:0046983
Bva04g03330 323 Gene3D - 114 196 IPR036638 GO:0046983
Bva04g03330 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 196 IPR036638 GO:0046983
Bva04g03330 323 Coils Coil 177 197 - -
Bva04g03330 323 SMART finulus 135 186 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03330 Bva-Chr4 26715627 26717279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03330 1 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 48.553 3.02e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva04g03330 HLH 4.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03330 - - jre:109020625 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03330 04 26715627 26717279 Bva04g03330 04 26715627 26717279 ECH