Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03328 ATGGAACTGAACAACACTATTGCTCCAGCTGCAGGGCCACCAACTGTTACCACAGAGAATCATACTTACATAAATTCAGAAAACCATAGTCATCACCATGGCCATTTCCCCTCAAAAGCCATTCTCATAGTCATCATAGCCGTCACATCCTTTATTGTCTTATTTGCTATTTTACTGATCATTTTCATGCTCCGTCGACTCAAATCCTCCAGCAAGAATGGAACTTTCAAAGATGACAGCAGAGTACTTCAAGACCCAAGTAGCAGGTTCATGACTTCAACAGCGTTAAACATTACTTCTAGCCCAGACGTGAAGGGTGGGTGTTTTTATGGGGGAAATTTGAGCCGGACACCAGCAACTAAATTTAGAGGAGTCCAAGTGTTCACGTATAGAGAGCTAGAATTGGCGACAGACGGATTCAGCGAAGCCAATATGATTGGAAAAGGTGAGTTTGGTTTGATGTACAGAGGAGTCCTCAGTGACGGCACTTTGGCAGCGATTAAGATGCTGAGCAGGGAAGACAAGCAGGGAGAGCGAGGTTTCAGAGTAGAGGTTGATCTTCTAAGCCGCTTGCACTCTCCTTATTTGGTGCAGTTGCTTGGCTATTGTGCTGACCAACACCATAGGCTCCTAATATTTGAGCTCATGCACAACGGTTCCCTACAACAAAATATCCACAATCAAAGTCAACCATTGGATTGGTCGACCCGGATGAGGATAGCCCTCGATTGCGCCCGGGCACTAGAGTTCCTCCATGAACATGCTGTCCCACCAGTAATTCACCGTGACTTCAAGTGTAACAATGTTCTACTGGATCAAAATTTCCGTGCCAAGGTATCAAATTTTGGATTGGCAAAGAGGGGCTCTGAGAAGATCAATGGTCAGGTTTCCACCCGTGTGTTGGGGACCACTGGATATCTTGCACCAGAATATGCTTCCACCGGCAAGCTCACTACAAAGTCAGATGTTTATAGCTATGGTGTGGTTCTTTTGGAGTTGCTAACCGGACGTGTACCGGTTGATATTAAGCGGCCTCCTGGGGAGCATGTGCTCGTCTCTTGGGCTCTTCCAAGGTTAACTAACAGAGAAAAAGTGGTCGAAATGATGGACCCAGCCCTACGAGGACAATTCTCGAAGAAGGATCTAATTCAGGTAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCAGATTACAGACCACTTATGACAGATGTTGTACAATCGCTGATACCACTTGTTAAAAATCCCTCCTATGTTAGTTCCTCTTCTTCCCTGAGATTTCAAAAACAAACAGCAAGCCCCTGCCATTA 1313 0.457 MELNNTIAPAAGPPTVTTENHTYINSENHSHHHGHFPSKAILIVIIAVTSFIVLFAILLIIFMLRRLKSSSKNGTFKDDSRVLQDPSSRFMTSTALNITSSPDVKGGCFYGGNLSRTPATKFRGVQVFTYRELELATDGFSEANMIGKGEFGLMYRGVLSDGTLAAIKMLSREDKQGERGFRVEVDLLSRLHSPYLVQLLGYCADQHHRLLIFELMHNGSLQQNIHNQSQPLDWSTRMRIALDCARALEFLHEHAVPPVIHRDFKCNNVLLDQNFRAKVSNFGLAKRGSEKINGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPRLTNREKVVEMMDPALRGQFSKKDLIQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVKNPSYVSSSSSLRFQKQTASPCH 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03328 437 CDD STKc_IRAK 146 413 - -
Bva04g03328 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Bva04g03328 437 SUPERFAMILY Protein kinase-like (PK-like) 121 410 IPR011009 -
Bva04g03328 437 Gene3D Transferase(Phosphotransferase) domain 1 216 430 - -
Bva04g03328 437 Pfam Protein tyrosine and serine/threonine kinase 144 410 IPR001245 GO:0004672|GO:0006468
Bva04g03328 437 PANTHER OS01G0750732 PROTEIN 17 435 - -
Bva04g03328 437 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 17 435 - -
Bva04g03328 437 ProSiteProfiles Protein kinase domain profile. 140 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03328 437 Gene3D Phosphorylase Kinase; domain 1 112 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03328 Bva-Chr4 26701704 26704325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03328 108 435 Receptor kinase-like Gene Family AT3G58690 60.651 2.74e-147 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bva04g03328 PK_Tyr_Ser-Thr 7.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03328 - - gmx:100499645 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03328 04 26701704 26704325 Bva04g03328 04 26701704 26704325 ECH