Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03322 ATGGATCACCAAGGGCATAGCCAGAACCACCAATTGGCGTACGGTTCAAACCCATACCAACCAAACCAAATATCTGGGTCAGCAGGGTCAGTTGGAGCCATTCAATCTGCTAGTCAGCCTTCTGGAGCCCAGCTGGGACAACATCAACTTGCTTACCAACATACTCATCAGCAACAACAGCAGCAACTTCAGCAACAACTCCAATCCTTCTGGGCAAACCAGTACCAGGAAATTGAGAGTGTGTCTGATTTCAAGAATCACAGCCTTCCCTTGGCAAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTTAGAATGATATCAGCTGAAGCACCAGTGATATTTGCAAGAGCATGCGAAATGTTTATATTAGAGTTAACCTTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGAGAACACTTCAGAAGAATGATATTGCAGCGGCAATTACAAGGACTGATATCTTCGATTTCTTGGTTGACATTGTTCCCCGGGAAGATTTGAAAGACGAAGTACTTGCTTCCATCCCTAGAGGAACAATGCCTGTTGCAGGGCCTGCCGATGCCCTTCCATATTGCTATATGCAACCTCAGCATGCCCCTCAAGTAGGCACTGCTGGTGTCATAATGGGTAAGCCTGTGATGGACCCAACTATATATGCTCAACAGTCTCATCCCTACATGGCACAACAGATGTGGCCACATGCACCAGAACAACGACAACCATCTCCGGATCATTA 743 0.4616 MDHQGHSQNHQLAYGSNPYQPNQISGSAGSVGAIQSASQPSGAQLGQHQLAYQHTHQQQQQQLQQQLQSFWANQYQEIESVSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMQPQHAPQVGTAGVIMGKPVMDPTIYAQQSHPYMAQQMWPHAPEQRQPSPDH 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03322 247 Pfam Core histone H2A/H2B/H3/H4 48 151 IPR007125 GO:0003677
Bva04g03322 247 MobiDBLite consensus disorder prediction 7 42 - -
Bva04g03322 247 Gene3D Histone, subunit A 50 166 IPR009072 GO:0046982
Bva04g03322 247 MobiDBLite consensus disorder prediction 1 42 - -
Bva04g03322 247 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 3 247 - -
Bva04g03322 247 SUPERFAMILY Histone-fold 55 160 IPR009072 GO:0046982
Bva04g03322 247 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 3 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03322 Bva-Chr4 26672344 26674498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03322 1 234 CCAAT-HAP5 Transcription Factor Family AT1G08970 63.830 3.70e-91 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva04g03322 CBFD_NFYB_HMF 5.3e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03322 K08066 - gmx:100527803 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03322 04 26672344 26674498 Bva04g03322 04 26672344 26674498 ECH