Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03313 ATGAGTCTTGATTTGGAATCGTTAGCAGAGGCGACCTCAGGAGCGATAGGATCACTGCTAAGCACCACCATCTTGTACCCGCTTGACACCTGCAAGAGCAAGTATCAGGCCGAGGTTCGAGTCCTTGGCAAGCAAAAATACAGGAACCTCTCTGATGTGTTATGGGAAGCAATATCCAACCGTCAGCTGCTCTCACTTTACCAAGGCCTTGGAACGAAAAACCTTCAATCTTTTATTTCGCAATTTGTCTACTTCTATGGCTACAGCTACTTCAAAAAACTGTACCTGAAAAAGAGTGGTTCTAAATCCATTGGAACCAAAGCAAACTTGTTGATTGCTGCTGCAGCTGGGGCCTGCAACGCCATTGTGACTCAGCCCCTGGATACAGCCTCTTCTAGGATGCAAACAAGTGCCTTTGGAAAGTCGAAGGGGCTCTTGATGACTCTCGCAGAAGGTAGCTGGACTAATGCATTTGATGGCCTAAACATTTCTTTACTGCTGACCTCAAACCCTGCAATTCAGTATACAGTTTTTGATCAGCTAAAACAACGAGCCCTGaagaataaacaaaacaaagatcaAGCATTATCTCCAGCATCACTTTCTGCATTTATGGCCTTTCTATTAGGTGCTATTTCGAAGAGCGTTGCTACCGTCCTGACATATCCTGCAATCAGGTGCAAGGTCATGATTCAAGCTGCAGACTCTGAAGAAGAAACctcaaaaaaagagagaaaatccCAGAAAACTGTGTCTGGAGTTCTCCTTGCAATATGGAAAAGGGAGGGCATACTGGGTTATTTCAAGGGATTGCATGCTCAGATCCTAAAGACTGTTTTGAGTTCAGCACTTCTTTTGATGATCAAGGAGAAGATCTCTTCAACTACTTGGGTTCTTATACTTGCACTTAGAAGATATTTCTTGCTTTCTAGAGTTAGAGTAAAAAACATATG 953 0.4187 MSLDLESLAEATSGAIGSLLSTTILYPLDTCKSKYQAEVRVLGKQKYRNLSDVLWEAISNRQLLSLYQGLGTKNLQSFISQFVYFYGYSYFKKLYLKKSGSKSIGTKANLLIAAAAGACNAIVTQPLDTASSRMQTSAFGKSKGLLMTLAEGSWTNAFDGLNISLLLTSNPAIQYTVFDQLKQRALKNKQNKDQALSPASLSAFMAFLLGAISKSVATVLTYPAIRCKVMIQAADSEEETSKKERKSQKTVSGVLLAIWKREGILGYFKGLHAQILKTVLSSALLLMIKEKISSTTWVLILALRRYFLLSRVRVKNI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03313 317 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 316 IPR045900 GO:0005347|GO:0006635|GO:0015217
Bva04g03313 317 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Bva04g03313 317 Pfam Mitochondrial carrier protein 201 293 IPR018108 -
Bva04g03313 317 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Bva04g03313 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Bva04g03313 317 SUPERFAMILY Mitochondrial carrier 7 291 IPR023395 -
Bva04g03313 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 295 IPR018108 -
Bva04g03313 317 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 316 - -
Bva04g03313 317 Gene3D Mitochondrial carrier domain 3 296 IPR023395 -
Bva04g03313 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03313 Bva-Chr4 26642556 26645352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03313 23 307 Chloroplast and Mitochondria Gene Families AT1G25380 26.557 4.48e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03313 - - gmx:100787682 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03313 04 26642556 26645352 Bva04g03313 04 26642556 26645352 ECH