Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03309 ATGAACCGGAATTCTGACTGCGATGATGAGAATACTCAGTGTAATGGAATCGATGATATTTCTCCAGATCAGGGTCATACAATtccaattttaaagaaaatccTTGATCTGAGCACCAAACTTCAGGATTTGAAGCATCGACATATAGCCCTATCTGATGAAGTGAAACTCACAACAAACTCATTTCCAGaccctaattttttaaagtcttTTCAGCTTCTCGGTTCTGAATATGAACTTCTGAAAAGAAAGTACCTCCATGAGTCTTCTGAGCGCATGCGCCTCTACAATGAAGTGATTGAACTTAAGGGAAATATAAGAGTTTTTTGCAGATGCAGACCattaagtgaaaatgaaattgctAATGGGACTGCATCTGTTATCAATTTTGAATCATCCCATGACAATGAGCTTCAAGTTATATGTTCTGATACTTCTAAGAAGcaatttaaatttgactttGTGTTTAAACCTGAAGATAACCAAGAGGTTGTTTTCGCACAAACCAAACCCATTGTTACCTCAGTCATGGATGGTTATAATGTCTGCATATTTGCCTATGGGCAAACTGGAACTGGTAAGACATTTACAATGGAGGGAACTCCAGAACATAGGGGAGTCAACTACAGAACATTGGATGAATTGTTCCGGATTTCTGAAGAGAGACGAGGCACAATGAAATATGAATTGCTTGTTAGCATGTTGGAGGTTTACAATGAGAAGATCAGGGACCTTTTGGCAGACAGTTCTACCCAGCCTACTAGAAAGTTGGAGATAAAGCAAGCAGTAGACGGAACCCATGAAGTTCCAGGACTTGTTGAAGCTCCTGTTTATGGAATAGAGGATGTGTGGGGAATGCTTAAGTCGGGAAACCGGGCGAGATCTGTTGGGTCCACCTGTGCCAATGAGCTTAGCAGCCGTTCTCATTGTTTGTTGCGAGTTACTGTTATGGGAGAAAATTTGTTAAGTAGTCAGAGGACAAGGAGTCATCTTTGGCTAGTAGACTTGGCTGGTAGTGAGCGAGTGGGAAGAACTGAAGTTGAAGGGGAAAGATTGAAGGAAtctcaatttataaataagtcCCTCTCAGCACTTGGTGATGTTATATCTGCCCTTGCATCCAAATCAGCTCACATTCCTTACAGGAACTCAAGGCTCACGCATATACTGCAAAGCTCCTTAGGAGGAGACTGCAAAACTTTGATGATTGTCCAGGTAAGTCCAAGTGCAAGAGACCTTGGAGAAACACTTTGTTCATTGAATTTTGCCACCCGTGTCCGAGGAATTGAGAGTGGTCCCGCTCGCAAGCAGATGGACCTAACTGAGCTTTTTAAATGCAAGCAGATGGTAGAAAAGCTCAAGCATGATGATAAGGAAACCAAAAAGTTGCAGGATAACATGCAAACTTTACAACTAAGACTTGCTGCAAAGGAACACATTTGCAGAACTCTTCAGGAGAAGGTTCGAGACCTTGAGAGCCAGATagcagaggaaagaaaaaccaGGCTAAAACAAGAAGGTAGATCCCTAGCTACTGCTTCAGCACTGGTATCGTCAAAAAAAGCAGCAGTTCAGAAGGCCGTAACAGAGAAGAAGCCTCCACTGGGTCCTTCGAAATTTAGAATGCCACTGCGAAGAATCTCCAATTTCTTGCCATCATCATCTCCGTTACCATCAAAGAAAAGAGTAGGTACCAGTTCCATGGCACCAGCTTCAGCGCATGGAAAGGAAAACATTGCCAGGACAACCTCCAACATAGAAAAAGCAGAAGGCCTTAGCAGACCAAGAAGAAGGGTCTCTATTGCAGTGAGAGCACCAGCACCATCAACAGCGCAACTTCTTCAACCTAGGAGGCGAGTATCTATTGCTGCAATCCGTCTTGACACAAGTTACATTACAACTCCGCTCCGTGCCTCTGCCTCTGGATTCAATGGTGGTAGCAATATAATGGAGGAACCATGCCAACAATCATCGATAAGGAGTAGAAAAGCTCGGTATTCAAGGTTGTTTGGCCCATTGCCAGAACTGAGAGCATTAAATGAGAACACTCCAATTGCCACTAGCAAGTTTATGGGTAGTCCAATGCAGGCAGATTCGCGGGTGGCTAAGCATCCAACTCTTGTTGCACTTCAACGCAAGCCTCTGTTGTGGAGTCCCCTCAAGCTCAGAGGTTTGAAAAATAACAGGAGAACATTAGTCTTGCCATCTCGGCCTTCCATTGAAATGTA 2228 0.4174 MNRNSDCDDENTQCNGIDDISPDQGHTIPILKKILDLSTKLQDLKHRHIALSDEVKLTTNSFPDPNFLKSFQLLGSEYELLKRKYLHESSERMRLYNEVIELKGNIRVFCRCRPLSENEIANGTASVINFESSHDNELQVICSDTSKKQFKFDFVFKPEDNQEVVFAQTKPIVTSVMDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLDELFRISEERRGTMKYELLVSMLEVYNEKIRDLLADSSTQPTRKLEIKQAVDGTHEVPGLVEAPVYGIEDVWGMLKSGNRARSVGSTCANELSSRSHCLLRVTVMGENLLSSQRTRSHLWLVDLAGSERVGRTEVEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSRLTHILQSSLGGDCKTLMIVQVSPSARDLGETLCSLNFATRVRGIESGPARKQMDLTELFKCKQMVEKLKHDDKETKKLQDNMQTLQLRLAAKEHICRTLQEKVRDLESQIAEERKTRLKQEGRSLATASALVSSKKAAVQKAVTEKKPPLGPSKFRMPLRRISNFLPSSSPLPSKKRVGTSSMAPASAHGKENIARTTSNIEKAEGLSRPRRRVSIAVRAPAPSTAQLLQPRRRVSIAAIRLDTSYITTPLRASASGFNGGSNIMEEPCQQSSIRSRKARYSRLFGPLPELRALNENTPIATSKFMGSPMQADSRVAKHPTLVALQRKPLLWSPLKLRGLKNNRRTLVLPSRPSIEM 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03309 742 MobiDBLite consensus disorder prediction 551 577 - -
Bva04g03309 742 PANTHER KINESIN-RELATED 46 734 IPR027640 GO:0003777|GO:0007018
Bva04g03309 742 PANTHER KINESIN-LIKE PROTEIN KIN-14S 46 734 - -
Bva04g03309 742 Coils Coil 467 508 - -
Bva04g03309 742 SMART kinesin_4 103 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03309 742 MobiDBLite consensus disorder prediction 551 566 - -
Bva04g03309 742 Gene3D Kinesin motor domain 100 474 IPR036961 -
Bva04g03309 742 Pfam Kinesin motor domain 111 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03309 742 CDD KISc_C_terminal 103 430 - -
Bva04g03309 742 PRINTS Kinesin heavy chain signature 299 316 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03309 742 PRINTS Kinesin heavy chain signature 330 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03309 742 PRINTS Kinesin heavy chain signature 179 200 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03309 742 PRINTS Kinesin heavy chain signature 379 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03309 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 465 IPR027417 -
Bva04g03309 742 ProSitePatterns Kinesin motor domain signature. 329 340 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva04g03309 742 ProSiteProfiles Kinesin motor domain profile. 105 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03309 Bva-Chr4 26624573 26628765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03309 71 454 Calmodulin-binding Proteins AT5G65930 41.237 1.42e-76 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03309 K10406 - gmx:100788477 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03309 04 26624573 26628765 Bva04g03309 04 26624573 26628765 ECH