Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03299 ATGGACAATGAGCAAGATAGGCTGTTGCCAATTGCAAACGTGGGCCGGATCATGAAACAAATTCTTCCTCCTAGTGCAAAGATCTCCAAAGAAAGCAAACAAGTAATGCAAGAATGTGCTACAGAGTTCATAAGTTTTGTGACTAGTGAGGCTTCTGACAAGTGTCACAAGGAGAATCGGAAGACCGTCAATGGTGATGACATCTGTTGGGCTCTGAGTGACTTAGGGTTTGATAACTATGCTGAGGCCATAGGAAGGTACTTGCATAAATACAGGCAAGCTGAGAGGGAGAAAGCAAATCAAAGCAAAGGTGATAAAGCCCAAGAAAAGCACGAAGCATCATCAACCAAAAGAAGCAGCCAAGAGAAGCACATTCATGCTCCACTAGAACGTAGGGAGAACGCTGAGAAGTCTCCTGCAAATCAAACTTG 431 0.4408 MDNEQDRLLPIANVGRIMKQILPPSAKISKESKQVMQECATEFISFVTSEASDKCHKENRKTVNGDDICWALSDLGFDNYAEAIGRYLHKYRQAEREKANQSKGDKAQEKHEASSTKRSSQEKHIHAPLERRENAEKSPANQT 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03299 143 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 135 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva04g03299 143 ProSitePatterns NF-YB/HAP3 subunit signature. 39 55 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bva04g03299 143 MobiDBLite consensus disorder prediction 93 143 - -
Bva04g03299 143 MobiDBLite consensus disorder prediction 93 137 - -
Bva04g03299 143 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 72 IPR003958 -
Bva04g03299 143 SUPERFAMILY Histone-fold 5 115 IPR009072 GO:0046982
Bva04g03299 143 Gene3D Histone, subunit A 1 142 IPR009072 GO:0046982
Bva04g03299 143 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-4 1 135 - -
Bva04g03299 143 PRINTS CCAAT-binding transcription factor subunit A signature 36 54 - -
Bva04g03299 143 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Bva04g03299 143 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03299 Bva-Chr4 26563236 26563667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03299 4 110 CCAAT-HAP3 Transcription Factor Family AT1G09030 74.312 8.13e-59 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva04g03299 CBFD_NFYB_HMF 1.2e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03299 K08065 - pvy:116118424 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03299 04 26563236 26563667 Bva04g03299 04 26563236 26563667 ECH