Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03290 ATGGGTTGTAGTTCTGAGGCTCTCCGCATGAgcctcatcttcatcttcgTGCTCCTATCATTACAAAGTACCCACATTTTGACTGCGGAAGCTCTATTCAATGAAGCAGGAAGCTTCCATTTCCATGCCCTATCAGAGATGTATTTTATGGAGGAAAATgggcaagaaaatgaaaaccacATTAAGAAAATCTCGGGACAGGACGAGAATGAAGAGAAGGAAGCTCTGATAGTGGAAAAGTTTAGAGCTTTGCTTGGACTAAAGAGTTTCCACACTAGAAGGCCATCCGATGGAGATTCTCTGTTTGTCTCTCCGTCACCTTCTCCATCGCCCGGCAATGAAGTTGAGGCTCCTGCTCCTGCACCTCTTCCTGTACCACACGTACGTGCCCATCCTCATCATCCACGGCGTCATTCCCATTGGAAACCACCACCTCATAAGATTCACGATGGAGACAGAGGCAGAGCTAGGAGAACGATAGTAGCTGTTCTTGTGTCTGTGGGTGTTGCTGCAGTGATTTTCGCTCTTGGCCTTGTCTGGTTTTACAGGAAATACAgaagtcaaagaaagaaacccaAAAGAACAACCCCTCTGTATAGCAAGAATAGAGGGAATAAAGGTAACTCTCGGAATTCATCAAGCAAGGTGAGTGTAAACTCTGGCTTAGATCTATTTTATCTCAATGCTTTAGGCACAGATGTAGAGCAACTTGGTTGCAGCACGAAACAAACTTCTGAGGCAGTAAGTAGAACTTCAAATCATAGTTCCCCAAAATGTTCAATTTATgagaagaggaaagaaaatcaagaagTGACTGTTTCAGATAATGGTAGCAGTTGTTCTGGAAAGGAAATTCTTTCTGTACACGAAGATGTGGGATCAGTGAAATATGATTCTGAATCTGAATCTGATGGTGACAACTCTTCCTCTGGTGATAAAATTATTCCCATGGAGAGCCATTCATCAGATGATGAGAGTTTTCACTCTTTAGCTGATTCTCACTCTTCAAATGTCAGACTTTCTCATGCTTCAGCTGGTCGTCTAAGTGGGACATCATCGCCTCGGTCTTCTCAAGCATCACTCTCAAAGCCTTCGCTGGCTGATTCTAGTTTTACACCGACACACCAAGATCCTTGTTCTCCCCAGAATTCAGTTCCAAATACACAATCTCCACATGTTGCCGAAGGGGCAGAGCAAAGGATTGAAGCTTTTTTGCAACGCCCACAACGCTTCGCGCTCCCTTCACCGCCTCCGCTTCCGCCGCCACCGCCACCCCGACCAATGCCTCTGTTTGCTTTGCATTCTCTTTCTAGAACCCCGTCTCAATCTCCACGTTCttcaatatttcataatttatcatCTCCAACAACAAGAAACTCAGGTTCCTCATTGGGAAAAAATCAAATGGGAGAAAATGATTTGCCTTCTTCATCTCAGTCGAATCCGATAGAATCTCCTCCCACTCCCAGCATTCCTCCGCCGCCTCGTCCACCGCCattttttaatgggaaaaCTCCGCCTCCACCGCCAGCACAACTTCCTCAATTTACGCCACGCGGCAAAGATGGAGCTGGGCTTCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCCCCTGATCGCACAACGGTTTGGGATAAGCTGCGAACGAGCTCATTTGAGTTGGACGAGGAAATGATAGAGTCACTTTTTGGCTATAATCTACAAAATTCAATGAAGAATAATGAAACAAAGAGCAAAAGCCCTTCTCCAAGCAAGCATGTACTTGAGCCTAAAAGGCTGCAGAACATAACAATACTCTCAAAAGCTCTAAATGTCACAGCTGAACAAGTATGTGCATCTCTAATACAAGGTAAGGGCTTGTCTTTACAACAATTGGAGGCACTGGTGAAAATGGTACCCACCAAGGAAGAAGAGGCTAAGCTCTCAAGTTATAAAGGAGACATCAATGAATTGGGATTTGCAGAGAGGTTTGTCAGAACAATGCTTAGCGTACCATTAGCCTTTCAAAGAGTGGAAGCAATGCTTTACAGAGAAACATTTGAAGACGAGGTTGTTCACCTTAGGAACTCTTTCTCAATGCTAGAGGAAGCGTGCAAGGAACTAAGATCAAGCAGGCTCTTCTTGAAGTTACTTGAAGCTGTGCTTAAAACTGGGAATCGTATGAACGTGGGCACAATCAGAGGAGGTGCCAGGGCATTTAAACTCGATGCCCTTCTCAAGCTTGCTGACGTTAAGGGAACTGATGGGAAAACGACGTTACTCCATTTTGTCGTTCAGGAGATTATTCGGTCAGAAGGGATCAGAGTTTCAGATAGCATTATGGGGAAAATCAATCAGAGAAGTAAAGACAGaacagaggaagaaaaggaagaggattACAGAATAATGGGTCTAGAACTTGTTTCTGGTCTGAGTACTGAACTATACAACGTTAAGAAGACAGCTACAATTGACTTGGATGTTCTGGCAAGCTCTGTCTCAAACCTCTCAGATGGATTGGCGAAGCTAGAACATCTAGTGCACAAGGAGCTATGTATGGATGAAAGAAGCGACAACTTTGTCAGTACAATGAAGATTTTCCTAAAATATGCAGAGAAAAGTCTGAAGGGGTTACAAGGGGATGAAGATAGGGTGCTAGCACGGGTGAAAGAAATTACAGAGTACTTTCATGGAGATGTGAGCAAAGAAGATGGAAACCCACTTCGGATATTTGTGATTGTAAGAGACTTTCTGGGCATGTTAGATAATGTGTGTAAAGAGCTTAGGAGGTCTAGAGCTCCTCGCAGTCCAAACCCCCTTTCTCCATTCCGATTGATTCGATTGCCTGTTGTTTCATATCATAGGAACTG 2858 0.4223 MGCSSEALRMSLIFIFVLLSLQSTHILTAEALFNEAGSFHFHALSEMYFMEENGQENENHIKKISGQDENEEKEALIVEKFRALLGLKSFHTRRPSDGDSLFVSPSPSPSPGNEVEAPAPAPLPVPHVRAHPHHPRRHSHWKPPPHKIHDGDRGRARRTIVAVLVSVGVAAVIFALGLVWFYRKYRSQRKKPKRTTPLYSKNRGNKGNSRNSSSKVSVNSGLDLFYLNALGTDVEQLGCSTKQTSEAVSRTSNHSSPKCSIYEKRKENQEVTVSDNGSSCSGKEILSVHEDVGSVKYDSESESDGDNSSSGDKIIPMESHSSDDESFHSLADSHSSNVRLSHASAGRLSGTSSPRSSQASLSKPSLADSSFTPTHQDPCSPQNSVPNTQSPHVAEGAEQRIEAFLQRPQRFALPSPPPLPPPPPPRPMPLFALHSLSRTPSQSPRSSIFHNLSSPTTRNSGSSLGKNQMGENDLPSSSQSNPIESPPTPSIPPPPRPPPFFNGKTPPPPPAQLPQFTPRGKDGAGLPKLKPLHWDKVRAAPDRTTVWDKLRTSSFELDEEMIESLFGYNLQNSMKNNETKSKSPSPSKHVLEPKRLQNITILSKALNVTAEQVCASLIQGKGLSLQQLEALVKMVPTKEEEAKLSSYKGDINELGFAERFVRTMLSVPLAFQRVEAMLYRETFEDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIIRSEGIRVSDSIMGKINQRSKDRTEEEKEEDYRIMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSDGLAKLEHLVHKELCMDERSDNFVSTMKIFLKYAEKSLKGLQGDEDRVLARVKEITEYFHGDVSKEDGNPLRIFVIVRDFLGMLDNVCKELRRSRAPRSPNPLSPFRLIRLPVVSYHRN 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03290 952 MobiDBLite consensus disorder prediction 485 515 - -
Bva04g03290 952 ProSiteProfiles Formin homology-2 (FH2) domain profile. 519 943 IPR015425 -
Bva04g03290 952 Pfam Formin Homology 2 Domain 527 917 IPR015425 -
Bva04g03290 952 MobiDBLite consensus disorder prediction 411 430 - -
Bva04g03290 952 Gene3D Formin, FH2 domain 543 933 IPR042201 -
Bva04g03290 952 MobiDBLite consensus disorder prediction 95 153 - -
Bva04g03290 952 MobiDBLite consensus disorder prediction 289 307 - -
Bva04g03290 952 MobiDBLite consensus disorder prediction 435 484 - -
Bva04g03290 952 MobiDBLite consensus disorder prediction 129 144 - -
Bva04g03290 952 SUPERFAMILY Formin homology 2 domain (FH2 domain) 532 928 - -
Bva04g03290 952 MobiDBLite consensus disorder prediction 244 394 - -
Bva04g03290 952 PANTHER FORMIN-RELATED 11 336 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bva04g03290 952 MobiDBLite consensus disorder prediction 198 216 - -
Bva04g03290 952 MobiDBLite consensus disorder prediction 331 394 - -
Bva04g03290 952 PANTHER FORMIN-LIKE PROTEIN 417 940 - -
Bva04g03290 952 PANTHER FORMIN-LIKE PROTEIN 11 336 - -
Bva04g03290 952 MobiDBLite consensus disorder prediction 244 258 - -
Bva04g03290 952 SMART it6_source 519 932 IPR015425 -
Bva04g03290 952 MobiDBLite consensus disorder prediction 111 128 - -
Bva04g03290 952 MobiDBLite consensus disorder prediction 411 533 - -
Bva04g03290 952 MobiDBLite consensus disorder prediction 191 216 - -
Bva04g03290 952 PANTHER FORMIN-RELATED 417 940 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03290 Bva-Chr4 26512909 26514579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03290 52 940 FH2 protein (formin) Gene Family AT3G05470 51.092 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03290 - - qsu:112030660 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03290 04 26512909 26514579 Bva04g03290 04 26512909 26514579 ECH