Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03277 atgatgatgatgacaatGGAGGGAATGATGGAGAAGGCTGTTGTTGATGATGTTATTAGGAGGCTACTTGAAGGCAAAGGAGGAAAACAGGTTCAGCTTTCAGAGTCTGAGATCCGTCAGCTCTGCGTCAACTCTCGCCAAATCTTCCTCTCACAGCCCAATCTCCTTGAGCTCCGTGCTCCAATCCGTATCTGCGGTGATATACATGGGCAGTACCAAGACTTACTGCGGCTTTTCGAATACGGTGGCTACCCTCCAGCCGCTAACTACTTGTTTCTGGGGGATTATGTAGACAGAGGGAGACAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCTGACAAAATTCATCTACTGAGAGGAAATCATGAGGATGCAAAGATAAACCGGATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTCACAGAATGCTTTAACTGTTTGCCTGTAGCTGCACTCATTGATGACAAAATACTCTGTATGCATGGTGGCCTCTCTCCAGagttacaaaatttgaatcaGATAAGAGAACTTTCAAGGCCTTGCGATATTCCAGATAATGGTCTCTTGTGTGATCTGCTTTGGTCTGATCCTGATTCTAGTATTGAGGGCTGGGCAGAGAGTGACCGAGGTATTTCATTTACGTTCGGGGCTAATGCACTCACTGagtttttggataaaaatgaCCTTGATCTTGTCTGCAGAGGTCATCAGGTAGTGGAAGatggatttttgttttttgccaAACGGAGATTAGTCACTATTTTTTCTGCTCCAAACTATGGTGGGGAGTTTGGTAATGCTGGTGCATTGTTGAGTGTTGATGAATCTCTTGTGTGTTCCTTTGAGATATTGAAACCGGCTGATAAAGGATCTGGAAGTGGTTCGTCAAAGGTCCTTAAGAAGCCCCCCAAAGCTGCATA 965 0.4104 MMMMTMEGMMEKAVVDDVIRRLLEGKGGKQVQLSESEIRQLCVNSRQIFLSQPNLLELRAPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGRQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTECFNCLPVAALIDDKILCMHGGLSPELQNLNQIRELSRPCDIPDNGLLCDLLWSDPDSSIEGWAESDRGISFTFGANALTEFLDKNDLDLVCRGHQVVEDGFLFFAKRRLVTIFSAPNYGGEFGNAGALLSVDESLVCSFEILKPADKGSGSGSSKVLKKPPKAA 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03277 321 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 309 - -
Bva04g03277 321 Pfam Serine-threonine protein phosphatase N-terminal domain 15 59 IPR031675 -
Bva04g03277 321 Gene3D - 7 308 IPR029052 -
Bva04g03277 321 Pfam Calcineurin-like phosphoesterase 62 253 IPR004843 GO:0016787
Bva04g03277 321 SUPERFAMILY Metallo-dependent phosphatases 18 303 IPR029052 -
Bva04g03277 321 SMART pp2a_7 33 303 IPR006186 GO:0016787
Bva04g03277 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 309 - -
Bva04g03277 321 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Bva04g03277 321 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Bva04g03277 321 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Bva04g03277 321 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Bva04g03277 321 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Bva04g03277 321 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Bva04g03277 321 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Bva04g03277 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03277 Bva-Chr4 26445452 26449096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03277 62 249 Calmodulin-binding Proteins AT5G63870 31.390 5.43e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03277 K06269 - gmx:100805030 585.874