Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03276 ATGGGGATCGATCTCAAAGCAGGAGGTAAGAGCAAAAAGACCAAGAGAACTGCACCAAAGTCCAATGATATCTATCTCAAGCTCTTGGTTAAGCTTTATCGCTTCCTTGTCCGGAGAAGTGGCAGCAATTTCAATGCTGTAATTCTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGGCTCCACTTTCTCTGTCAAGGTTGATTGAGTTTATGAAGGGAAAGGAAGATAAGATTGCTGTCGTTGTAGGGACTGTGACTGATGATATACGGGTATATGAAGTTCCACCCATCAAAGTTACAGCACTAAGGTTTACAGAGACAGCAAGGTCAAGAATCGAAAAAGCAGGGGGTGAATGCTTGACCTTTGATCAGCTGGCTCTTAGAGCCCCTCTTGGACAAAGCACGGTTCTGCTTAGAGGCCCAAAGAATGCTCGTGAAGCTGTTAAACACTTTGGTCCTGCGCCGGGTGTGCCACATAGCCATACCAAGCCTTACGTGCGATCCAAGGGAAGAAAGTTTGAGAGGGCTAGAGGAAGGAGAAATAGCAAAGGCTTTAGGGTGTG 563 0.46 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRSGSNFNAVILKRLFMSKVNKAPLSLSRLIEFMKGKEDKIAVVVGTVTDDIRVYEVPPIKVTALRFTETARSRIEKAGGECLTFDQLALRAPLGQSTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03276 187 Gene3D - 1 187 - -
Bva04g03276 187 MobiDBLite consensus disorder prediction 151 187 - -
Bva04g03276 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Bva04g03276 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Bva04g03276 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Bva04g03276 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Bva04g03276 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03276 Bva-Chr4 26442353 26444967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03276 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 76.882 3.58e-102 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03276 K02883 - gmx:100791657 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03276 04 26442353 26444967 Bva04g03276 04 26442353 26444967 ECH