Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03269 ATGGCCATGGCCGTAAAGTTGATGCTATCTCTTGCCATTTTGGTTGccttctcctctctctctattgAAGCCGATTTCTCGTTTTCCCAAGAAAATCACATATGCAACCTCACATCCTACCCTTCATTCTGCAGAACTACTTTGACTCCTCACTTTTCTGGATCCATACGTGACCATGGCCAATTCTTCCTTCGCCAATCTTTATCATCAGCAAAAACGTTTCATGAACTGGTCTCTTCTCACCTCAAAGAACCTTCTACAATTCCAGCTTCCACAAAACTTGCTCTTCAAGATTGTCAGCAATTGGCTGAACTTAACATTGATTTATTGTCCAATATCCTCCAAACCATTGCAAACATTATATCTCATTTTCAAGCTTGTGATTTGCAAACATTGCTTAGTGCCATTTTAACCAATCAGCAAACATGCTTGGACGGCATTAATGAGGTAACCCCCTATCCAAGCATTATCACTGGCTTACTCGGCCCTATCTCTGATGGCATTAAGCTTTATAGCATATCTCTAGCCCTTTTCAACCGTGGTTGGGCTTCGGTGACAGAAACAAAGCCAGCTGAGACAACCATTACCATGAACAGAAAGCTACTCCAAGAAAGCATTGGCAATGATATGACGGTGAGTGAAAAAGTGGTGGTGAACCCAGATGGAACTGGGAATTTCCCAACCATTAATGATGCAGTGGCGGCTGCACCTAATAATACAGGAACCAACAACGGCTACCATGTTATTTATGTTGTTGCTGGTGTTTACAATGAATATGTGTCTATTCCTAAGAGCAAAGAAAACTTGATAATCGTGGGCGATGGCATTAATAGAACTGTCATCACCGGCAATCGAAGCGTGGTTGATGGCTGGACCACATTTCAATCTGCAACTTTTGCTGTGGTTGGGAAAGGATTTGTTGCAGTGAACATAACATTTCAGAATACAGCCGGAGCCGCCAAGCATCAAGCAGTTGCTGTGCGAAATGGGGCAGATCAGTCAACCTTCTACAAGTGTAGTTTTGAAGGCTACCAAGACACGCTCTACACACATTCCCTGCGCCAATTCTACAAAAACTGTGACATTTATGGGACAGTAGACTTCATATTTGGTAATGCAGCAGTGGTATTCCAGGACTGTAACATGTATCCAAGACTTCCACTGGAGAACCAATTCAATGCCATCACAGCACAAGGCCGAAAAGACCCAAATCAAAACACTGGCATTTCCATACAGAATTGTAACATCAAAGCAGCCAGTGACTTGAGCGATGCTAGTTCTAGCGCAAAGACTTACCTGGGTCGGCCATGGAAGGAGTATTCAAGGACAGTTTATATGCAATCTTTCATGGATACCCTGATTGAAGCAGAGGGTTGGGTCGAATGGTATGGGGATTTTGCCTTGAGCACACTGTATTACGCGGAATATTGTAACTGGGGACCAGGATCAAATACCAGCAACAGGGTCACATGGCCGGGCTACCATGTGATTAACGCAAAGGATGCAGATGATTTTACGGTGGCCAAATTTATACAAGGTCATATATGGTTGCCCAACACTGGGGTGCCTTTCAGACCTGCTTTACAGTG 1589 0.4317 MAMAVKLMLSLAILVAFSSLSIEADFSFSQENHICNLTSYPSFCRTTLTPHFSGSIRDHGQFFLRQSLSSAKTFHELVSSHLKEPSTIPASTKLALQDCQQLAELNIDLLSNILQTIANIISHFQACDLQTLLSAILTNQQTCLDGINEVTPYPSIITGLLGPISDGIKLYSISLALFNRGWASVTETKPAETTITMNRKLLQESIGNDMTVSEKVVVNPDGTGNFPTINDAVAAAPNNTGTNNGYHVIYVVAGVYNEYVSIPKSKENLIIVGDGINRTVITGNRSVVDGWTTFQSATFAVVGKGFVAVNITFQNTAGAAKHQAVAVRNGADQSTFYKCSFEGYQDTLYTHSLRQFYKNCDIYGTVDFIFGNAAVVFQDCNMYPRLPLENQFNAITAQGRKDPNQNTGISIQNCNIKAASDLSDASSSAKTYLGRPWKEYSRTVYMQSFMDTLIEAEGWVEWYGDFALSTLYYAEYCNWGPGSNTSNRVTWPGYHVINAKDADDFTVAKFIQGHIWLPNTGVPFRPALQ 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03269 529 Pfam Plant invertase/pectin methylesterase inhibitor 33 177 IPR006501 GO:0004857
Bva04g03269 529 Gene3D - 209 528 IPR012334 -
Bva04g03269 529 ProSitePatterns Pectinesterase signature 2. 362 371 IPR033131 -
Bva04g03269 529 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 180 IPR035513 -
Bva04g03269 529 SMART PMEI_2 24 177 IPR006501 GO:0004857
Bva04g03269 529 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 180 IPR035513 -
Bva04g03269 529 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 155 IPR006501 GO:0004857
Bva04g03269 529 CDD PMEI-like_3 34 183 - -
Bva04g03269 529 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 13 525 - -
Bva04g03269 529 PANTHER PECTINESTERASE 13 525 - -
Bva04g03269 529 SUPERFAMILY Pectin lyase-like 212 525 IPR011050 -
Bva04g03269 529 Pfam Pectinesterase 216 513 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03269 Bva-Chr4 26418078 26419917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03269 8 528 Carbohydrate Esterase AT4G02330 51.664 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03269 K01051 - gmx:100810329 736.873