Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03265 ATGTCGCGTGAGCGGTTGATTGAAGGGTCAGGCATAATGTCGGAAACATTCTCGCCGTCGGCGTGTCATTCATTCTTCATTTTCGAAGAATTGCCGACAGCCACTATCGTATCCGTGTCCCGACCAGAGACCGGAGATATTAGCCCAATCCTTCTTTCTTATACTATTGACTTGTACTACAAACAGTTCAGGTGGCGCTTACGGAAGAAAGCATCCCAAGTTCTCTATCTACATTTCGCTTTGAAGAAACGTGCATTAATTGAAGAATTTCATGATAAGCAAGAGCAGGTGAAAGAATGGCTTCAAAGCTTAGGAATAGTGGATCAAATAGCAATGGTGCAGGACGATGAAGAACCTGATGATGGAACTGTACCTTTAAATCATGAAGACAGTGTTAAAAGCAGATATGTTCCATCCATTGCTGCTCTACCAATCATTCGTCCATCCTTAGGAGGGCAGCAGTCAGTTGCAGATAAAGCAAAGGTTGCAATGCAGGGCTATTTGAATCATTTTCTAGGAAATACTGATATTGTGAATTCTCGAGAGGTCTGCAAATTTTTGGAGGTCTCCAAGTTATCCTTTTCACAAGAATATGGTCCAAAATTGAAAGAAGGCTACGTAATGGTCAACCATATATCATCTCGGGATTCAGTTGTAACATGCTTACCATGTGATTGGTTTAGCTGTTTTAATAGCAACTGGCACAAGTTATGGGCTGTTTTAAAACCTGGGTTTTTGGTCTTGTTGGATGATCCTTTGGACAACAAACCACTAGACGTAATTGTTTTCGATGTTCTCCCATCCTCAAACGGAAATAAGGGATACCAAGTATCTTTAGCTAGTCATTTAAAGGAAGGCCATCCTTTGCATTACACATTTGAGGTTACTGGTGGAAATAGGAGCATAAAATTGAGAACTACCAGTAATGCTAAAGCTAAAGATTGGGTTCTTGCAATTAATGAAGCTGGTCTAAGACCTTCAGAGGGCTGGTGTCACCCTCATCGTTTTGGTTCCTTTGCTCCCGAAAGAGGTTTGGCTGAAGATGGCAGCCAAGCACAATGGTTTATAGATGGAGAAGCAGCTTTTGCAGCAATTGCTTCTTCAATTCAAGAAGCAAAGTCAGAGATCTTCATTACAGGATGGTGGCTTTGCCCTGAGCTTTATCTGAAACGTCCTTTTACTGGCTATTCTTCCTTAAGGCTGGACAAATTACTAGAAGCAAAAGCTAAGCAAGGGGTTCAgaTATACGTGCTTCTTTACAAGGAGGTTTCAATAGCTTTAAAAATCAACAGCTTGTATAGTAAGAGAAGACTCCTCAACATTCATGAGAATGTGAGGGTATTGCGCTATCCAGATCGTTTTCCAACTGGCATTTATTTATGGTCGCATCATGAAAAACTAgtaattattgattataagATTTGCTATATTGGAGGATTAGATTTATGCTTTGGCCGATACGACACAACTGAACATAAAGTGGGTGATTACCTCCCTGTGCTGTGGCCAGGAAAGGACTATTACAACCCAagAGAATCTGAACCAAATTCTTGGGAAGACACGATGAGAGATGAATTGGATCGTGAAAAATATCCTCGTATGCCGTGGCATGATGTCCATTGTGCTCTTTGGGGACCTCCCTGTCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCTAAGAGAACCAAAGCTCCAAACGAACAAACGATTCCACTACTCATGCCTCATCACCACATGGTTCTCCCTCACTACTTGGGAAGAAGCAAAGAGATAGACAttaacagaaagaaaagagaagaacaagaacaagagaaCAACAAAGAAATCTCAAGGCATGATTCCTTTTCCTCAGAATCACCATTGCAAGATATACCACTCCTTTTACCTCAAGAAGCTGGTGAACTATTTACTTCTGATGGAAACAGTACTACAGATAATTGTGAAAACTTGCCTCTAATTTCGGATACCCAGACAAATGTTTTTCAAGATGAAGACAACCTCGATGAAAGTTCGGAAACTACAGAAAGTGGTAATTTTGATTCTGCTGCAACTTTGGAATTTGGACAAGTCGGTCCTCGTACTGCTTGTTGCTGTCAGATAATCAGAAGTGTCAGCCAGTGGTCTGCTGGAACAAGTCAGCATGAAGAAAGCATTCACACTGCATATTGTTCTCTTATTGAAAAAGCAAAGCATTTTATCTACATTGAGAACCAATTCTTCATATCAGGTCTAGCTGGGGATGATATTATACAGAACCGTGTATTGGACGCACTTTATAGGCGTATTTTGCAAGCCCGGAAAGAAGAACAGATTTTCAGAGTTATAATTGTGATGCCTCTCTTGCCTGGCTTTCAGGGTGGTCTGGATGATGGTGGTGCAGCAACCGTGAGAGCCATAACGCATTGGCAATATCGAACAATTTCTAGAGAGAAACACTCCATATTGCATAATCTTAAATCCTTGCTTGGTCCCAAAACACATGACTACATTTCTTTCTACGGTCTGCGATCTCATGGTATACTTTATCCCGGTGGTCCAATGGCTACAAGTCAGGTCTATGTTCACAGCAAACTGATGATAATAGATGATCGCCTTGCTATAATTGGGTCATCCAATATAAACGACAGAAGTTTACTAGGATCAAGAGACTCTGAGATTGGAGTGGTTATTGAAGACAAAGAGTATGTTGAGTCATCCATGAATGGAAAGCCCTGGAAAGCTGGGAAACTTTCCTATACCCTTCGTTGCTCCCTATGGTCCGAGCACCTTGGCCTGAACACTGGAGAGATTGCTAAAATCAGTGATCCAGTGGCAGATGCAACCTACAAGGACTTATGGACAGCAACTGCAAAGGAAAATACTAGGATATACCATGAGGTGTTTGCTTGCGTTCCCAACGATGAGATACATTCGAGAGCTGCTCTCAGACAAAGCAGGAACCAGTGGAAGGAGAAGCTTGGACATACCACCATAGACCTTGGAATAGCTCCGGAGAAGTTAGTATATCAAGAGAATGGATTAACCAAAGTAACAGACTCCATGGACAGATTGAAGTCTGTAAAGGGTCATCTTGTTTCCTTCCCGTTGGAGTTCATGCGTGAAGAAGATTTAAGACCAGTTGTAATTGAGAGTGAGTTTTATGTGGCTCCTCAAGTATATCACTG 3173 0.4116 MSRERLIEGSGIMSETFSPSACHSFFIFEELPTATIVSVSRPETGDISPILLSYTIDLYYKQFRWRLRKKASQVLYLHFALKKRALIEEFHDKQEQVKEWLQSLGIVDQIAMVQDDEEPDDGTVPLNHEDSVKSRYVPSIAALPIIRPSLGGQQSVADKAKVAMQGYLNHFLGNTDIVNSREVCKFLEVSKLSFSQEYGPKLKEGYVMVNHISSRDSVVTCLPCDWFSCFNSNWHKLWAVLKPGFLVLLDDPLDNKPLDVIVFDVLPSSNGNKGYQVSLASHLKEGHPLHYTFEVTGGNRSIKLRTTSNAKAKDWVLAINEAGLRPSEGWCHPHRFGSFAPERGLAEDGSQAQWFIDGEAAFAAIASSIQEAKSEIFITGWWLCPELYLKRPFTGYSSLRLDKLLEAKAKQGVQIYVLLYKEVSIALKINSLYSKRRLLNIHENVRVLRYPDRFPTGIYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTTEHKVGDYLPVLWPGKDYYNPRESEPNSWEDTMRDELDREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRTKAPNEQTIPLLMPHHHMVLPHYLGRSKEIDINRKKREEQEQENNKEISRHDSFSSESPLQDIPLLLPQEAGELFTSDGNSTTDNCENLPLISDTQTNVFQDEDNLDESSETTESGNFDSAATLEFGQVGPRTACCCQIIRSVSQWSAGTSQHEESIHTAYCSLIEKAKHFIYIENQFFISGLAGDDIIQNRVLDALYRRILQARKEEQIFRVIIVMPLLPGFQGGLDDGGAATVRAITHWQYRTISREKHSILHNLKSLLGPKTHDYISFYGLRSHGILYPGGPMATSQVYVHSKLMIIDDRLAIIGSSNINDRSLLGSRDSEIGVVIEDKEYVESSMNGKPWKAGKLSYTLRCSLWSEHLGLNTGEIAKISDPVADATYKDLWTATAKENTRIYHEVFACVPNDEIHSRAALRQSRNQWKEKLGHTTIDLGIAPEKLVYQENGLTKVTDSMDRLKSVKGHLVSFPLEFMREEDLRPVVIESEFYVAPQVYH 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03265 1057 CDD PH_PLD 178 322 - -
Bva04g03265 1057 SUPERFAMILY Phospholipase D/nuclease 693 900 - -
Bva04g03265 1057 SMART PH_update 201 326 IPR001849 -
Bva04g03265 1057 Gene3D Endonuclease Chain A 667 914 - -
Bva04g03265 1057 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 459 486 IPR001736 GO:0003824
Bva04g03265 1057 SUPERFAMILY PH domain-like 200 322 - -
Bva04g03265 1057 SUPERFAMILY Phospholipase D/nuclease 308 579 - -
Bva04g03265 1057 MobiDBLite consensus disorder prediction 599 617 - -
Bva04g03265 1057 PIRSF PLD_euk 33 1057 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bva04g03265 1057 Pfam Phospholipase D Active site motif 459 486 IPR001736 GO:0003824
Bva04g03265 1057 Gene3D - 201 327 IPR011993 -
Bva04g03265 1057 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 853 880 IPR001736 GO:0003824
Bva04g03265 1057 PANTHER PHOSPHOLIPASE D 23 1054 IPR015679 -
Bva04g03265 1057 Pfam PLD-like domain 726 899 IPR025202 -
Bva04g03265 1057 SMART pld_4 853 880 IPR001736 GO:0003824
Bva04g03265 1057 SMART pld_4 459 486 IPR001736 GO:0003824
Bva04g03265 1057 MobiDBLite consensus disorder prediction 599 623 - -
Bva04g03265 1057 CDD PLDc_vPLD1_2_yPLD_like_2 713 897 - -
Bva04g03265 1057 CDD PLDc_vPLD1_2_yPLD_like_1 352 496 - -
Bva04g03265 1057 Gene3D Endonuclease Chain A 346 610 - -
Bva04g03265 1057 PANTHER PHOSPHOLIPASE D ZETA 2 23 1054 - -
Bva04g03265 1057 ProSiteProfiles PH domain profile. 200 324 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03265 Bva-Chr4 26397778 26403722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03265 27 1057 Phospholipase D Gene Family (Wang group) AT3G05630 67.019 0.0 1415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03265 K01115 - gmx:100796914 1682.54