Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03262 ATGGGTCATTTATCCTCTATGTTCAATGGGTTGGCAAGGTCGCTTTCATTGAGGAAAGGGAAGAGTTCTGAGAGATGCGATGGGAGAGAAGCTGCAGAAGCAATGGCAAAGGATGCTAAGAAAAATGACTTGATACTGTGTACGTCCGGCAATGTTAGTGTTGGTGGTTCAAACAACTTTTGCTCAGTTTTCTCCAAAAGAGGCAACAAAGGAGTGAACCAGGATTGTTGCGTAGTCTGGGAgGAATTTGGATGCCAAGCGGATATGATCTTCTGTGGGATATTTGATGGGCATGGACCGTGGGGTCACTTTGTAGCCAAAAGTGTAAGGAAATCAATGCCACCATCTTTGCTATGCAACTGGCAGGAAACACTTGCTCAAACTTTGCTTGATCCAGATCTTGATTTGGAGACAGAGAAAAAGCAACATCGATTTGACATATGGAAGCATTCGTACTTGAAAACTTGTGCTGCCATCGATCAGGAACTAGAGCAGCAGCGTCGCAAAATAGATTCCTTTTACAGCGGAACAACAGCTCTATCAATTGTCAGACAGGGCGAACTGATTATCATAGCAAATGTTGGTGATTCTCGTGCTGTACTAGCTACAAGTTCAGAAGATGGAAGCTTGACGGCAGTTCAGCTTACAGTTGATTTCAAGCCCAATTTACccgAGGAGGCAGAGAGAATAACTGAGAGCCGAGGGCGGGTGTTCTGCTTAGATGACGAACCGGGCGTGCATAGAGTGTGGTTACCTGATGAGGAGTCACCTGGGTTGGCAATGTCTAGAGCTTTTGGTGACTACTGTGTGAAGGATTATGGTGTTATTTCAGTCCCCGAAGTAACGCACAGGAATATAACCAGCCAAGATCAATTTGTTGTCCTAGCAACAGATGGGGTGTGGGATGTAATTTCCAATCAAGAAGCAGTAGATATTGTATGTTCAGCAGCAGATAGAGCAAAATCAGCTAGACTTCTGGTGGAGTGCGCAGTGCGTGAATGGAAACGCAAGAGGAAAGGGATTGCCATGGATGACATTTCAGCTATCTGTCTCTTCTTTCACTCTTCTTA 1070 0.4467 MGHLSSMFNGLARSLSLRKGKSSERCDGREAAEAMAKDAKKNDLILCTSGNVSVGGSNNFCSVFSKRGNKGVNQDCCVVWEEFGCQADMIFCGIFDGHGPWGHFVAKSVRKSMPPSLLCNWQETLAQTLLDPDLDLETEKKQHRFDIWKHSYLKTCAAIDQELEQQRRKIDSFYSGTTALSIVRQGELIIIANVGDSRAVLATSSEDGSLTAVQLTVDFKPNLPEEAERITESRGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCVKDYGVISVPEVTHRNITSQDQFVVLATDGVWDVISNQEAVDIVCSAADRAKSARLLVECAVREWKRKRKGIAMDDISAICLFFHSS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03262 356 CDD PP2Cc 59 353 IPR001932 -
Bva04g03262 356 SUPERFAMILY PP2C-like 51 354 IPR036457 -
Bva04g03262 356 Pfam Protein phosphatase 2C 86 327 IPR001932 -
Bva04g03262 356 ProSiteProfiles PPM-type phosphatase domain profile. 60 353 IPR001932 -
Bva04g03262 356 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 356 - -
Bva04g03262 356 Gene3D - 54 355 IPR036457 -
Bva04g03262 356 PANTHER ALPHABET, ISOFORM E-RELATED 1 356 - -
Bva04g03262 356 SMART PP2C_4 51 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03262 Bva-Chr4 26389458 26392261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03262 1 354 PP2C-type Phosphatase Gene Family AT3G05640 69.748 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03262 - - gmx:100801309 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03262 04 26389458 26392261 Bva13g03269 13 22666305 22669353 BWGD