Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03258 ATGAGTAAGACTGAATCGTCCAGGATGAAGCCACCACTTGTTCCACTTGCAACGCTTATTGGCCGTGAGCTTCGAAatgaaaaagttgaaaagccTTTTGTGAAGTATGGACAGGCTGGTTTGgcaaagaaaggagaagattACTTTCTGATAAAGACTGACTGCCAGAGGGTTCCTGGAGAGTCATCGACCATTTTTTCTGTCTTTGCGATCTTTGATGGGCATAACGGTATATCAGCTGCTATATTTGCGAAGGAAAACTTACTGAATAATGTTATGAGTGCGATACCACAAGATATCAGCAGGGATGAGTGGCTTCTAGCTCTTCCTCGAGCTCTAGTTGTTGGATTTGTGAAAACTGACATTGAATTTCAGCAAAAGGGAGAAACTTCCGGAACAACAGCTACTTTTGTTCTGATTGATGGTTGGACTGTCACTGTTGCGTCTGTTGGGGATTCCCGTTGCATATTAGATACCCAGGGAGGTATAGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAGAATGCAGAAGAGAGGGAGCGTGTCACTGCTAGTGGTGGTGAAGTAGGACGGCTCAATGTCTTTGGAGGCAATGAGGTTGGGCCCCTCCGATGCTGGCCTGGTGGTTTGTGCCTTTCCAGATCAATTGGTGACACAGATGTGGGTGAATATATTGTGCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGCGGAAGGCTTATTATTGCCTCTGATGGTATTTGGGATGCCTTATCTTCTGATATGGCTGCAAAGTCTTGTCGGGGTCTACCTGCAGAACTTGCTGCAAAGCTAGTGGTTAAGgAGGCTCTGAGGTCAAGGGGCCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATCCCTTCTGATCATCCTGTATTGCCACCAATtccaagaaagaaacataataTGTTAACTTCGCTTTTATTTGGAAAGAAGTCTCAGAACTCTACAAATAAAGGTACTAGTAAGCTTTCTGCGGTTGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCAATGCTTGCAGAGAGGCTGGGTAAGGATTTTCCATTGAATGTGAACTCGGGGATTTTTAGGTGTGCAGTCTGCCAAGCGGATCAGCCCCCTGGCGATGGTTTATCAGTGAATTCAGGGCCTTTTTTCTCCCCAGCATCAAAGCCATGGGAAGGTCCATTCCTCTGCACGAACTGTCGTAGGAAGAAAGATGCCATGGAAGGAAAAAGGCTAGCAGACCCGCTGTA 1277 0.4377 MSKTESSRMKPPLVPLATLIGRELRNEKVEKPFVKYGQAGLAKKGEDYFLIKTDCQRVPGESSTIFSVFAIFDGHNGISAAIFAKENLLNNVMSAIPQDISRDEWLLALPRALVVGFVKTDIEFQQKGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPPIPRKKHNMLTSLLFGKKSQNSTNKGTSKLSAVGVVEELFEEGSAMLAERLGKDFPLNVNSGIFRCAVCQADQPPGDGLSVNSGPFFSPASKPWEGPFLCTNCRRKKDAMEGKRLADPL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03258 425 Gene3D - 33 301 IPR036457 -
Bva04g03258 425 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 421 - -
Bva04g03258 425 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Bva04g03258 425 CDD PP2Cc 43 297 IPR001932 -
Bva04g03258 425 PANTHER ALPHABET, ISOFORM E-RELATED 2 421 - -
Bva04g03258 425 Pfam Protein phosphatase 2C 66 280 IPR001932 -
Bva04g03258 425 SMART PP2C_SIG_2 51 297 IPR001932 -
Bva04g03258 425 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Bva04g03258 425 SMART PP2C_4 23 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03258 Bva-Chr4 26362600 26365945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03258 1 420 PP2C-type Phosphatase Gene Family AT1G09160 78.095 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03258 - - tcc:18600536 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03258 04 26362600 26365945 Bva13g03264 13 22641405 22644770 BWGD
Bva04g03258 04 26362600 26365945 Bva04g03258 04 26362600 26365945 ECH