Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03257 ATGGCGACAGAGCAAGCCTTGCCATTCTCTGCTGTATCTGTGGTCGAAGATGTTCTTCAACAGCAAGCCAATCGATTGAACGACGTTGACTTGGCTTCCAGAAAGGCAGAAGAacattCATTGAGAAGGTATGAAGCGGCAGGTTGGCTGCGAAAAACAGTTGGAGTTGTTGGAGGCAAAGATTTACCAGCAGAGCCTTCTGAAGAAGAATTCAGGATCGGATTGCGTAGCGGGATCATCCTTTGCAGTGTCATCAACAAAATCCAGCCCGGAGCGGTGCCCAAGGTTGTCGAAGCTTCCTGCGATTCTGTTGTTGTTCCAGAAGCAGCTCTGTCTGCGTTTCAGTACTTTGAAAATGTGAGGAATTTTCTTGTAGCTGTGGAGGAATTGGGTCTTCCCACCTTTGAAGCTTCTGACTTGGAACAGGGAGGAAAGTCTTCGAGGATAGTGGATTGTGTTCTGGCACTCAAGTCATACAGTTCGTGGAAAGAGGGAGGCAAAAATGGGTCATGGAAATATGGTGGGAATACAAAGCCACCTACCATTGGAAAACCATTTCAGCGCAAGAACTCAGAACAATTCATGAACAATTTATCAAAAACAGTTTCAAGCGACATTGGCTGGCAAAGTGATAATTACAGTGATCCCGGCCATGGAGAGTTTTCCCTTCATTCCTTGAACTCACTTGTTCGTGATTATTTGTCCGacaagaaacaagaagaaattccCATCgTCGTGGAAACTCTGCTTGGCCATGTCATGAAGGAGTTTGAACGTCGCTTGGCGAACCAACCTGAAGAGTTGAGAACAGCTTTAGAAGAAAAGGCAGCATCCGcaatagaaaattcaatttcaagaaATGCTTCTGATGACGAAGAGGGATCTGCATCTGTTGATGAAGAGGGACCTGCGTCTGTTGACGAAGAGGTAAGGCTAGAACCCAATATAGACTCTTTAAAGATTGAAGAAATGGAGGATATACAGCATATACAAGAGaaatattatgataaaaaacaagacgaagaaaaaagaatccgGCTTCTGAAGCAGAAAAAGATGGTCGAACAACAAATAAGAGACATTCAGgaattaaaaataatcatgcATCATACGAAAACAGAAATGCTGGTTTTGCAAAAGAGATACCAGGAGGAGTTCATCTATCTAGCCAAGCACATGCGTGGTCTAGCTTCTACTGCTGCAGGGTATCAGAAAGTTCTTGAAGAAAACCGAAAGTTATACAATCAGGTGCAGGACCTGAAAGgGAATATTAGGGTATATTGCCGAGTTCGACCATTTTTGAGCGGGCAACCAAGCCATTCTAGCACTGTCAGGGACTTGGAAGAAGGAAATATCTCAATTATAAACCCTGCAAAATATGGAAAAGAGGGGAAGAAAACATTTAGTTTCAACAAAGCGTTTGGTCCTACTGCAACACAAGCCGAGGTTTTCTCAGACACCCAGCCTCTTATTCGTTCTGTTCTTGATGGCTACAATGTCTGTATATTTGCTTATGGTCAGACAGGTTCAGGAAAAACTCATACTATGTCTGGACCAAACGACCTTACTGAGGAAACCGTAGGTGTCAACTACCGAGCACTGAGAGATCTTTTCCTTCTGTCAGAGCAGAGAAAGGACACCATTTGCTATGATATATCCGTTCAGATGCTAGAAATATACAATGAGCAAGTCAGAGATCTCCTTGCCACAGATGGTGCTGCTAACAAAAGATTAGAAATTCGTAACAGTTCTCAAAATGGAATTAATGTACCCGATGCAAACCTTCTTCCTGTTTCATCAACATCAGATGTCATAAATTTGATGAACTTGGGGCATAAGAACCGTGCTGTAAGTGCTACTGCTATGAATGACCGGAGCAGTCGTTCACACAGCTGCCTGACAGTTCATATTCAAGGTAGGGATCTGACCTCTGGAAATATTATTCGAGGGAGTATGCATCTCGTTGACCTTGCAGGAAGCGAAAGAGTAGATAAATCTGAGGTAAAAGGAGATAGGTTGAAGGAAGCAGTACACATCAACAAATCTCTTTCTGCCCTAGGAGATGTAATTTCTGCGCTTGCTCAAAAGAGTTCACATGTTCCCTACAGGAACAGTAAACTGACCCAACTGCTTCAAGATTCTCTCGGAGGACAAGCAAAGACACTCATGTTTGTTCATATCAGTCCTGAGCATGAAGCTCTTGGAGAAACACTGAGTACACTCAAGTTTGCCGAACGGGTCTCCACTGTTGAACTTGGTGCTGCCAAAGTTCACAAAGAAAACACAGATGTGAAAGAGCTTAAAGAACAGATTACCAATCTAAAGGCAGCCTTAGCAAGGAAGGAGGCAGAAACAGAACAGTTTCAACATTCTGTAAATAGCAGTGCTGAAATACATAGATTGAAATCTAATGGGTCTTCCCCAATACATCATAGTTTGGCCTCTGGAGGATATAGGCTACCAAAAGATGATGCAAGTGGCTTGGAGgGCCGGAAGAAGTCTTTATCGAATCTGAAAAGGCGAAGCCTTGATCCGCAAGACATAAGGAACGCACATCCTTGGGCACCTGTTAGGAATCGCAGTATGAAGTCAAAGGAAGACGATAAAGAATCTCTTCCCGAAGATTGGATTGATAAGGCAACGATGAACAGGAATGACAGCTTAACTAGCGATGATAGCCTAGTGGGACAGTGGGAAGCAGAAAGCAAACAGTCTTCTCCAATGCTTAGTCCTGGTTATCTTTCAGACTCTTCAAAAGTTTGGTCGGAGCATTCCTTTAAGGTGACATTGCAGAAAAAGGATAGCCAAGACTACGATGAATTTCATAGGAATCGGTATGAGATGGCCACCACAGATGACTATGATGACCTAGAATTTGCAACGAGTGATTCTTCAGAATCAGATTTGCATTGCCAATTGCATGTACCTAGATCAAACAGCCTTCCCAATGGACTTGGGCCCAAAACCAAGAAATCAACTCATTCCAAACCATCAAAGATCCCAGAAGCCAGGAGTATGATCCCGTCATTGATTCCAACGCCATCGACATCAAGGAAACAAGGCACACTAAGTAGTCAACCCAGAAAGCTGGCAGGTGCAGGTGATGGGAAGAGAAGAAGTGGaaatttaaagtg 3134 0.4218 MATEQALPFSAVSVVEDVLQQQANRLNDVDLASRKAEEHSLRRYEAAGWLRKTVGVVGGKDLPAEPSEEEFRIGLRSGIILCSVINKIQPGAVPKVVEASCDSVVVPEAALSAFQYFENVRNFLVAVEELGLPTFEASDLEQGGKSSRIVDCVLALKSYSSWKEGGKNGSWKYGGNTKPPTIGKPFQRKNSEQFMNNLSKTVSSDIGWQSDNYSDPGHGEFSLHSLNSLVRDYLSDKKQEEIPIVVETLLGHVMKEFERRLANQPEELRTALEEKAASAIENSISRNASDDEEGSASVDEEGPASVDEEVRLEPNIDSLKIEEMEDIQHIQEKYYDKKQDEEKRIRLLKQKKMVEQQIRDIQELKIIMHHTKTEMLVLQKRYQEEFIYLAKHMRGLASTAAGYQKVLEENRKLYNQVQDLKGNIRVYCRVRPFLSGQPSHSSTVRDLEEGNISIINPAKYGKEGKKTFSFNKAFGPTATQAEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNDLTEETVGVNYRALRDLFLLSEQRKDTICYDISVQMLEIYNEQVRDLLATDGAANKRLEIRNSSQNGINVPDANLLPVSSTSDVINLMNLGHKNRAVSATAMNDRSSRSHSCLTVHIQGRDLTSGNIIRGSMHLVDLAGSERVDKSEVKGDRLKEAVHINKSLSALGDVISALAQKSSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEHEALGETLSTLKFAERVSTVELGAAKVHKENTDVKELKEQITNLKAALARKEAETEQFQHSVNSSAEIHRLKSNGSSPIHHSLASGGYRLPKDDASGLEGRKKSLSNLKRRSLDPQDIRNAHPWAPVRNRSMKSKEDDKESLPEDWIDKATMNRNDSLTSDDSLVGQWEAESKQSSPMLSPGYLSDSSKVWSEHSFKVTLQKKDSQDYDEFHRNRYEMATTDDYDDLEFATSDSSESDLHCQLHVPRSNSLPNGLGPKTKKSTHSKPSKIPEARSMIPSLIPTPSTSRKQGTLSSQPRKLAGAGDGKRRSGNLK 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03257 1044 PRINTS Kinesin heavy chain signature 700 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03257 1044 PRINTS Kinesin heavy chain signature 651 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03257 1044 PRINTS Kinesin heavy chain signature 620 637 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03257 1044 PRINTS Kinesin heavy chain signature 497 518 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03257 1044 ProSitePatterns Kinesin motor domain signature. 650 661 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva04g03257 1044 SUPERFAMILY Calponin-homology domain, CH-domain 34 183 IPR036872 -
Bva04g03257 1044 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 1024 - -
Bva04g03257 1044 Gene3D - 27 197 IPR036872 -
Bva04g03257 1044 SMART ch_5 42 159 IPR001715 GO:0005515
Bva04g03257 1044 MobiDBLite consensus disorder prediction 1009 1027 - -
Bva04g03257 1044 MobiDBLite consensus disorder prediction 280 312 - -
Bva04g03257 1044 Gene3D Kinesin motor domain 418 792 IPR036961 -
Bva04g03257 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 423 789 IPR027417 -
Bva04g03257 1044 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 1024 - -
Bva04g03257 1044 Coils Coil 254 274 - -
Bva04g03257 1044 Coils Coil 757 787 - -
Bva04g03257 1044 Coils Coil 403 423 - -
Bva04g03257 1044 ProSiteProfiles Kinesin motor domain profile. 423 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03257 1044 ProSiteProfiles Calponin homology (CH) domain profile. 40 161 IPR001715 GO:0005515
Bva04g03257 1044 Pfam Kinesin motor domain 429 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03257 1044 Coils Coil 331 357 - -
Bva04g03257 1044 SMART kinesin_4 421 758 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva04g03257 1044 MobiDBLite consensus disorder prediction 802 891 - -
Bva04g03257 1044 MobiDBLite consensus disorder prediction 974 1044 - -
Bva04g03257 1044 Pfam Calponin homology (CH) domain 43 160 IPR001715 GO:0005515
Bva04g03257 1044 MobiDBLite consensus disorder prediction 859 881 - -
Bva04g03257 1044 CDD KISc_C_terminal 421 752 - -
Bva04g03257 1044 MobiDBLite consensus disorder prediction 974 991 - -
Bva04g03257 1044 MobiDBLite consensus disorder prediction 824 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03257 Bva-Chr4 26353929 26359282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03257 411 750 Calmodulin-binding Proteins AT5G65930 42.941 6.80e-77 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03262 13 22634098 22639695 Bva04g03257 04 26353929 26359282 ECH
Bva04g03257 04 26353929 26359282 Bva04g03257 04 26353929 26359282 ECH