Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03251 ATGGATCGGGAAGGAGGACCCAACGGCGGATGTTGCTACTACTCTGTTCTGGGGATTCGCAGGGATGCCTCCTTCTCTGATATACGCACTGCTTATCGCAAGCTCGCTCTGAAGTGGCACCCAGATAGATGGGCTCGGAACTCTGCAATAGCCGGAGAGGCCAAGCGGCGGTTTCAGCAAATCCAAGAAGCATACTCAGTTCTTTCTGATCAGTCTAAGAGATCAATGTACGACGCGGGGCTCTACGATCCTTTAGACGAAAGCGAgGAGTTCTGTGATTTCATGCAAGAAATGATCTCCATGATGAACAATGTAAAAGACGAGGGGGACAGTTTGGAGGATCTGCAAAGGATGTTCGTGGAGATGGTCGGTGGTGATGGGATTAGCTTTGACTTAAACGACGATCGAACGACTGGCAAGAGAACACGTGTCACCTCATCAAGGGGTAACGCAGCTACGCGTGGCAACTCTTGCCGTTA 479 0.5052 MDREGGPNGGCCYYSVLGIRRDASFSDIRTAYRKLALKWHPDRWARNSAIAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLDESEEFCDFMQEMISMMNNVKDEGDSLEDLQRMFVEMVGGDGISFDLNDDRTTGKRTRVTSSRGNAATRGNSCR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03251 159 Pfam DnaJ domain 13 78 IPR001623 -
Bva04g03251 159 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Bva04g03251 159 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Bva04g03251 159 SMART dnaj_3 11 73 IPR001623 -
Bva04g03251 159 PANTHER PUTATIVE, EXPRESSED-RELATED 11 145 - -
Bva04g03251 159 PRINTS DnaJ domain signature 53 73 IPR001623 -
Bva04g03251 159 PRINTS DnaJ domain signature 32 47 IPR001623 -
Bva04g03251 159 PRINTS DnaJ domain signature 14 32 IPR001623 -
Bva04g03251 159 MobiDBLite consensus disorder prediction 134 159 - -
Bva04g03251 159 Gene3D DnaJ domain 8 105 IPR036869 -
Bva04g03251 159 PANTHER PUTATIVE, EXPRESSED-RELATED 11 145 - -
Bva04g03251 159 MobiDBLite consensus disorder prediction 143 159 - -
Bva04g03251 159 CDD DnaJ 12 70 IPR001623 -
Bva04g03251 159 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03251 Bva-Chr4 26325657 26327117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03251 12 79 C2H2 Transcription Factor Family AT1G74250 43.478 1.09e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03251 - - pop:18098616 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03251 04 26325657 26327117 Bva04g03251 04 26325657 26327117 ECH