Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03250 ATGGCTTCAAAAAGGAGATCTGACAATAATGGCAATGACAGGAATCTTGAAATTCCAGTTCAACATTCAAAACGGAGAAATGGAGATTCAGAACAGATAGCGATACGTGCCATTGAAATTTTGAGGGTTGTACTACCCATTTGGGATGTTGCCTCCAGCATGGAGGATTTATTTCGAAGAGTGGTTGGACAGGAGCTAGATCGTCAGCTATTTACAAGTCCAAATGTTCATCAGATTGGAGCATCTGTGGGCAAGACACCAGAGCTGCGTTTTACAAATAGGGTGGCTTCtacaattttttacaaaatccaAGATCAAATCTGGGGAAAGATAACCCTCTCGCTCTGCACAAGAAGCGGAAAATTCAGGTTAGGAGCTAGAGTTGCAGAATCACCTCCCAATGAAGAAAACATCATTAGGGAGGGGATAAGTGAACCTTTTAAGGTCAAAGATAGCAGAGAGTACAAGAAGCACTATACTATTAAGGATCTGTTGCGGCTGTACATAACCAATCCATCTTCATTACAAGAGAAGTTTGGCAagattttgaagaagaaatgggaAACAATTATTAAACATGCTAATTCGAGTGTTATAGACGAATACGGTTATAAGCTGTACATTTACCCCACCGATCAACAGGCAGAACTAATGCGCCTGCTCTTCAATCCCATTAACATGCATGATATGGTGGAAAGAGTGAAGCAACATGCttgcaaaaatttgaaagatttaATATCACTTGATGAGGCAACAACAATCAACTTGCTGGCTCAATTGGGTGCTTCGCCAAATCAAAGTCTGCTACAGATTATCTTCACATCTGGCTTCCCAACTGCACACCAAGGTCAACCAGAAAATTTGGCTGCCTCATCAGCACATCTTTGTGAACTAGTGCATAATCCAATGCCGCAAAGCAGTTATGCACGGGCAGATCAATTTCCATTTCATCTCACCTGCATTGATGATTGGACCTTCACCCTCGATGGATCCCAGTTTCCAGTTGCACCTCCTCAGTATTCATCTGCAACTCATCTTCCTCATTCTTCTAccacattgatgta 1064 0.3966 MASKRRSDNNGNDRNLEIPVQHSKRRNGDSEQIAIRAIEILRVVLPIWDVASSMEDLFRRVVGQELDRQLFTSPNVHQIGASVGKTPELRFTNRVASTIFYKIQDQIWGKITLSLCTRSGKFRLGARVAESPPNEENIIREGISEPFKVKDSREYKKHYTIKDLLRLYITNPSSLQEKFGKILKKKWETIIKHANSSVIDEYGYKLYIYPTDQQAELMRLLFNPINMHDMVERVKQHACKNLKDLISLDEATTINLLAQLGASPNQSLLQIIFTSGFPTAHQGQPENLAASSAHLCELVHNPMPQSSYARADQFPFHLTCIDDWTFTLDGSQFPVAPPQYSSATHLPHSSTTLM 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03250 354 PANTHER OS02G0177800 PROTEIN 116 160 IPR012416 GO:0005516
Bva04g03250 354 PANTHER OS02G0177800 PROTEIN 159 270 IPR012416 GO:0005516
Bva04g03250 354 Pfam Calmodulin binding protein central domain 158 196 IPR046830 -
Bva04g03250 354 MobiDBLite consensus disorder prediction 1 25 - -
Bva04g03250 354 PANTHER CALMODULIN-BINDING PROTEIN 60 G 116 160 - -
Bva04g03250 354 PANTHER CALMODULIN-BINDING PROTEIN 60 G 159 270 - -
Bva04g03250 354 Pfam Calmodulin binding protein-like N-terminal domain 114 151 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03250 Bva-Chr4 26322750 26325203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03250 117 254 Calmodulin-binding Proteins AT5G26920 27.717 4.65e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03250 - - twl:120010228 98.2117