Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03249 ATGAGAATGGAAGTAGAGAAAAGAAGGTCCAAGGGAAGCTTCCTCAACTTGTTTGATTGGAATGGAAAATCCCGAAAGAAGCTGTTCTCTGACACTCCTAACACACCTGCAGATCCAaggcaaggaaaagaaaatgaggagaACATGCCAAAGTCACAGTTCAATAGGATAAAGGTGGATGAGAATGGAGCGAGCCCGCGCGACACAGAAAGTTGTGATTTTAACTGTGCGTTATCAATTGATAGTGATGAAGGATGTGGGATTAAAGCCCCTGGGCTCGTAGCGAGACTAATGGGTTTGGATTCATTGCCAGCTTCAACAGTTGCTGAGCTCTCCTTCACAACATTATATGGTTCTAACTCTCTTAGACCTTGTCACTCTCATGAGGACACTCTTGTGTCAGCAACTGTCTCTCATCCTGCGAACTACATAAACATGCCAAATAAGATGGAGAAACCTTCTTGGGATGCCATGGAATCAAGGGCACAGAAAGTGCAAAATCGTCCAATTAAGAGGTTTCAAACTGAAATGCTGCCTCCAAAGTCAGCTAAACCAATTCCAGTTACTCACAATAAACTATTGTCTCCTATCAAGAGTCCTGGTGTCATCCCACCCAAGAATGCAGCTCGCATAATGGAGGCAGCTGCTAAGATAATTGAGGGCAGCCCCCGAGCGTATATGAAGAATAAAGTGTTGTCTTCATCTGCTCAGTATGCATCCTTGCCTAAACTTGTTAATCCAAGCACTTCCAACCCTTTGAAAGATAAGAATAGTGACAGGAgcaataatgtatataattgcACTCCAGCATTGAAGGGTTCAAGAGATTCAGCAAAACGTAGTTCTCATCAATCGGGGAGTAAAGGAAAAACAGTTTCACTTGCGACACAAGCGAAGGCAAATGTTGATAGCAGAGattcttcaacttcaaatgGTAATAGGGGATATAGGAAACAGAAAGAACAGGAGGAGTCCAAATCAAGCCAGAGACCAATTATTCAGCAGGTGATGCAGCGGAGAACTCATACTAACCGGAATAGCAACGTGCCAGGGCAGGATACCCACAACCGGAATAGTCTTATTAACAAAGGTAAATCAGCTTCAAAAGACTCAGATTCCAACAAGCCAAGCACACGAACAAAGTCATTTGAAAGTTCCATTGGGTCGAGTAAGATGAAAAATGAGGGTACTGTAAACACCAATATTGGGCCCAAAAGGTCAAACAGAAGGGCAGTTGATTCTCGATCGGAGTTTTCACTATCCAAAACAAAGAACAgttcccaaaagaaaaggtgtACTGGCAGGGATGTTCTTAATGAGGCAAGAGTTACTGATAATGcagtaaataattatgaagGTAAGTCCATAAAGTGCAATATTACAGCTGACAGCATGAATACGGTGGCATTTAACATGAATAAAAGCAAGGAAGTGATTTCATTTACCTTCACATCTCCCTTGAGAAGAAGCATGCCTGAGCTGCAGTCCTCTGCTCAAGTGATGGGAATAGAGAACAGCATCGATATGGATACTCTTGGTCAAAATGTTAAACTTCATCCCAAAAAGTTATCCCTATCTCCTCCTGGGTTACATATGGTAGATGGTGATGCTTTAAGCACCCTGTTGGAGAGAAAGCTACAAGAATTGGCATCTAGAATTAACTCATCTCAATGCACACTGGCTACAGAGGAATCTTCTGCTGGTTTTACAAGTTTGGAAGACGAAGTTCACACTAAGGTAGGCACCGAATCAAGTGAACAAGACAGAAGTTTCCACCCTGATCTGCTTGGTGATAAATTGGACAGCATGCATGACTGTGACTGTTCTTCGGGTGTATCACTGTTGTTTAACATGAATCAACTGGAGCGATCAGAAGCACTGGAAGAACATGGCTGTAGCAACTACAGTGAAATTGGAAACGAACATGGTTCTCAACACTACAGAGCAGttacaaattttcaaagtcctttggCCAATGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGTAGCACGGTTAATTCATCCGTGCAAGAGGAAGAGGTATCAAATTTTTCTCCAACAAATGAATCTGTGTCACTCGAAGGAGAGCTGAATTCGTCTCAAAGAAGCCCTTCTACGTTGTCTGAGAAGATGACCCTTAAACAATCAAGtggaaaatcaaatttgacaGATTTTAAGAGATCAGGGAACTTGGAACTTGAATATGTAAAGGATGTAGTTAACAATGCAGAGTTAATGGCAGAAGATTTTGTGCTGGGTCAAACCAATAAGATAGTAATGCAAAATCTCTTTGATGCGTTGGAGAGTAGGGGCAAGGTAACAGAAAACCATGGAGAGGAGTTTTCCAAGCTGGAGAGAAAGGTTTTGTTTGACTGTGTATGCGAGTGCTTAGAATTGAGATGTACCCAGACTTTTGTTGGAAGCTGCAAAGCATGGCCTAGATGGGCGACATCAATTCAGAGGAAGGATTGGTTGGCAGAAGATTTGTACAGGGAGATGGTGGGTTTTAAAAGCACGAAAGAGGTAACGGAGGATGAGCTTGTCCACAAGGACATGAGCAGTGGATATGGGAGATGGGTTGATTTTGACATTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGTGGGACATACTATCTTGTTTGATTAGTGAATTGGTTTCTGATGTGTTGCTTGCTTA 2684 0.4042 MRMEVEKRRSKGSFLNLFDWNGKSRKKLFSDTPNTPADPRQGKENEENMPKSQFNRIKVDENGASPRDTESCDFNCALSIDSDEGCGIKAPGLVARLMGLDSLPASTVAELSFTTLYGSNSLRPCHSHEDTLVSATVSHPANYINMPNKMEKPSWDAMESRAQKVQNRPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGVIPPKNAARIMEAAAKIIEGSPRAYMKNKVLSSSAQYASLPKLVNPSTSNPLKDKNSDRSNNVYNCTPALKGSRDSAKRSSHQSGSKGKTVSLATQAKANVDSRDSSTSNGNRGYRKQKEQEESKSSQRPIIQQVMQRRTHTNRNSNVPGQDTHNRNSLINKGKSASKDSDSNKPSTRTKSFESSIGSSKMKNEGTVNTNIGPKRSNRRAVDSRSEFSLSKTKNSSQKKRCTGRDVLNEARVTDNAVNNYEGKSIKCNITADSMNTVAFNMNKSKEVISFTFTSPLRRSMPELQSSAQVMGIENSIDMDTLGQNVKLHPKKLSLSPPGLHMVDGDALSTLLERKLQELASRINSSQCTLATEESSAGFTSLEDEVHTKVGTESSEQDRSFHPDLLGDKLDSMHDCDCSSGVSLLFNMNQLERSEALEEHGCSNYSEIGNEHGSQHYRAVTNFQSPLANESYLDSEDSAYGSTVNSSVQEEEVSNFSPTNESVSLEGELNSSQRSPSTLSEKMTLKQSSGKSNLTDFKRSGNLELEYVKDVVNNAELMAEDFVLGQTNKIVMQNLFDALESRGKVTENHGEEFSKLERKVLFDCVCECLELRCTQTFVGSCKAWPRWATSIQRKDWLAEDLYREMVGFKSTKEVTEDELVHKDMSSGYGRWVDFDIEAFEEGLEVEWDILSCLISELVSDVLLA 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03249 894 Pfam DUF761-associated sequence motif 82 108 IPR032795 -
Bva04g03249 894 MobiDBLite consensus disorder prediction 328 367 - -
Bva04g03249 894 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 893 - -
Bva04g03249 894 MobiDBLite consensus disorder prediction 242 432 - -
Bva04g03249 894 Pfam Domain of unknown function (DUF4378) 734 886 IPR025486 -
Bva04g03249 894 MobiDBLite consensus disorder prediction 25 56 - -
Bva04g03249 894 MobiDBLite consensus disorder prediction 664 723 - -
Bva04g03249 894 MobiDBLite consensus disorder prediction 378 407 - -
Bva04g03249 894 MobiDBLite consensus disorder prediction 40 54 - -
Bva04g03249 894 MobiDBLite consensus disorder prediction 284 315 - -
Bva04g03249 894 PANTHER DUF4378 DOMAIN PROTEIN 3 893 - -
Bva04g03249 894 MobiDBLite consensus disorder prediction 242 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03249 Bva-Chr4 26314236 26319029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03249 5 892 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.360 1.12e-105 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03249 - - gmx:100804688 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03249 04 26314236 26319029 Bva13g03247 13 22562413 22567443 BWGD
Bva13g03247 13 22562413 22567443 Bva04g03249 04 26314236 26319029 ECH
Bva04g03249 04 26314236 26319029 Bva04g03249 04 26314236 26319029 ECH