Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03245 ATGTCTCATACCAACAACAACGTATCTGGGGTTGACAACACGTTCAGAAGAAAATTCGATCGGGAGGAGTATTTGGAAAGAGCTCGAGAGCGTGAGAGGCAGGAGGCGGAGGCACGATCTAAACCCAAAGCTAAAGGTCCCCCGGTGCAGAGACAACCCTTGAAACATAGAGATTATATAGTAGACCTTGAATCTCGCTTGGGGAAGACTCAGGTTGTTACACCAGTTGCGCCACTAAGCCAGCAGGCTGGATACTTCTGCTCAGTTTGTCAGTGTGTGGTAAAGGATTCTGCAACCTATTTGGATCATATTAATGGAAAGAAACATCAAAGAGCTTTGGGCATGTCTATGCGAGTAGAACGTGCTTCTGTTAAACAGaagaggaagaaagaaagcgACAGcgtaaagaaaggaaaaaaagaaaagAAGGAGAAGGCAGCAGTAGAAGAAACTGAAATAGATCCTGATGTTGCAGCTATGATGGGCTTCGGCGGTTTCCGTTCATCCTA 509 0.4244 MSHTNNNVSGVDNTFRRKFDREEYLERARERERQEAEARSKPKAKGPPVQRQPLKHRDYIVDLESRLGKTQVVTPVAPLSQQAGYFCSVCQCVVKDSATYLDHINGKKHQRALGMSMRVERASVKQKRKKESDSVKKGKKEKKEKAAVEETEIDPDVAAMMGFGGFRSS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03245 169 Gene3D Classic Zinc Finger 79 117 - -
Bva04g03245 169 MobiDBLite consensus disorder prediction 122 149 - -
Bva04g03245 169 Coils Coil 21 41 - -
Bva04g03245 169 Pfam Zinc-finger of C2H2 type 85 109 - -
Bva04g03245 169 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Bva04g03245 169 MobiDBLite consensus disorder prediction 20 44 - -
Bva04g03245 169 MobiDBLite consensus disorder prediction 20 56 - -
Bva04g03245 169 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 126 169 IPR040107 GO:0000398|GO:0005681
Bva04g03245 169 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 7 130 IPR040107 GO:0000398|GO:0005681
Bva04g03245 169 SUPERFAMILY beta-beta-alpha zinc fingers 81 123 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03245 Bva-Chr4 26303427 26305939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03245 4 126 C2H2 Transcription Factor Family AT3G05760 79.675 9.16e-71 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03245 K12848 - gmx:100527057 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03245 04 26303427 26305939 Bva04g03245 04 26303427 26305939 ECH