Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03235 ATGGGTTGCCAAGAAGACTCGTTGATTGGAAGAGTGTGTGAGCTGTATGAACAAATTTCCAAGCTAGAGAGTCTGAAACCCTGCAAAAATGTCGACATGATCTTCACACAACTCGTCCTCACGTGCATGCCACCTAGCCCCATCGATGTCACCAAGCTCCCCAAAAGGGTCCAAGACATAAGATCCAAGCTTATAAGGCTGTGTGGCCAAGCCGAGGGTCTTTTAGAGTCTCACTACTCAGCCATCTTAGGCTCTTACGACAACCCACTTGATCATCTCCACATTTTCCCTTACTACACCAATTACCTCAAGCTTGGTCTCCTTGAATTCACCATCCTTAGTAAACACTGCACCCATGTCCCTAGCAAAATTGCCTTTGTGGGGTCTGGTCCCCTTCCCTTCACTTCCATTGTTTTGGCCTCTAATCACTTACCCACCACCGCTTTTCACAACTATGACTTGGACCTATTAGCCAATTCCCAAGCTCAGCGCTTAGTTCAATCCGATCCTGACTTGTCAAAGCGCATGGTTTTCCACACCAATGATATATTTGATGTGACCAGCGCTTTGAAAGACTATGAGGTTGTTTACTTGGCTGCACTGGTGGGCATGAACAAAGAGGAAAAGAGTCGAGTCATTGATCATTTGGCTAAGCACATGGCTCCTGGTGCCTTCCTCATGCTCAGGAGTGCCCATGGTGCTCGTGCTTTTCTCTACCCTGTGGTTGATCCTTGTGATCTTCGTGGATTTGAGATTATGTCTGTCTTCCATCCTACCGATGAGGTTATTAACTCTGTGCTCATAGCACGTAAGTATCCAATGCCTATACACTCGCTTGACCAAGGACTTGGCTCTATGATACTTACAAATAAGTGCAAGTGCTCTGAGATTGAAGCTTTCAATCCACTCAACCATGGCAATATGATCGAGGAATTGGCCATTGAGGAGCAATCATCTTA 959 0.4609 MGCQEDSLIGRVCELYEQISKLESLKPCKNVDMIFTQLVLTCMPPSPIDVTKLPKRVQDIRSKLIRLCGQAEGLLESHYSAILGSYDNPLDHLHIFPYYTNYLKLGLLEFTILSKHCTHVPSKIAFVGSGPLPFTSIVLASNHLPTTAFHNYDLDLLANSQAQRLVQSDPDLSKRMVFHTNDIFDVTSALKDYEVVYLAALVGMNKEEKSRVIDHLAKHMAPGAFLMLRSAHGARAFLYPVVDPCDLRGFEIMSVFHPTDEVINSVLIARKYPMPIHSLDQGLGSMILTNKCKCSEIEAFNPLNHGNMIEELAIEEQSS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03235 319 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Bva04g03235 319 PANTHER SYNTHASE, PUTATIVE-RELATED 1 318 - -
Bva04g03235 319 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Bva04g03235 319 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Bva04g03235 319 PANTHER NICOTIANAMINE SYNTHASE 3 1 318 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03235 Bva-Chr4 26259281 26260240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03235 1 317 Nicotianamine Synthase Gene Family AT1G09240 60.625 1.03e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03235 K05953 - jre:108981230 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03235 04 26259281 26260240 Bva04g03235 04 26259281 26260240 ECH