Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03229 atgGCGTCTTTCGAATCAATCTTAGATTCCAGTAATTCAAACACGTTGCAAGAATCCAATCAGAAAAAGCGCAGAAAAATCGGAGATCACTTTGAAGATCAAAATTCATTTACTCAGATTCGGTGGAAATCCGAGACAGAGGAACAGATCTACTCCTCCAAGCTCGTCGAAGCTCTCCGGCAGATTCTTCGCCGGAATCCTTCATCAACGGCCAATTCTAGTAGAAGTCGTGAAGTTCGCGACACTGCAAACAGAGTTCTAGCCGTGGCCGCCAGAGGAAGGACTCGGTGGAGTAGGGCTATTCTGACGACTCCACTTAGCAGATGGAGGTTCCAGAGGCAGCATAAGAAGGTGAAGAAGGTCTCCAGCGGATTGCAGAAACCGGTAATTAGGAGGGAGAGAAGAAGGTTACCGGCTGCGCAGAAGAAAATCCGCGTTCTCAGCCGGTTAGTTCCCGGTTGCCGGAAAGTTTCTTTCCCAAATCTCCTGGAAGAAGCCACCGATTACATTTCAGCCTTAGAGATGCAAGTTCGAGCCATGACTACACTCACAGAGCTACTCAATGATGGGGCGCCGGCCGATCGGCTCGGGTGGACTCGACCGTG 605 0.4992 MASFESILDSSNSNTLQESNQKKRRKIGDHFEDQNSFTQIRWKSETEEQIYSSKLVEALRQILRRNPSSTANSSRSREVRDTANRVLAVAARGRTRWSRAILTTPLSRWRFQRQHKKVKKVSSGLQKPVIRRERRRLPAAQKKIRVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLTELLNDGAPADRLGWTRP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03229 201 MobiDBLite consensus disorder prediction 1 30 - -
Bva04g03229 201 CDD bHLH_AtIBH1_like 131 184 IPR044549 GO:0006355
Bva04g03229 201 Gene3D - 111 191 IPR036638 GO:0046983
Bva04g03229 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 16 197 IPR044660 GO:0006355
Bva04g03229 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 188 IPR036638 GO:0046983
Bva04g03229 201 PANTHER TRANSCRIPTION FACTOR BHLH149 16 197 - -
Bva04g03229 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Bva04g03229 201 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03229 Bva-Chr4 26211767 26212803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03229 18 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 47.753 1.10e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03229 - - aprc:113873135 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03229 04 26211767 26212803 Bva13g03228 13 22467239 22468370 BWGD
Bva13g03228 13 22467239 22468370 Bva04g03229 04 26211767 26212803 ECH
Bva04g03229 04 26211767 26212803 Bva04g03229 04 26211767 26212803 ECH