Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03219 ATGCGTCCCGGTCAATGCACGATGGATTTCCTCATATGTAGCTATATATCACATGCTTATAATCTCACGTCTTCTCTCTTTATAAgcagaaaggagaagagagtGAAAACTAGAGCAAATGGCAAGCGGGCTCTTTCCATTCTTGGCCATGTTCTTTGTTCAACTGGGCTTTGCAGGGATGACCATTACCTCAAAGCTTGCAATCGAATCGGGCATGAGCCCTCTGGTCCTAGTCGTTTATCGACAAATCCTTGCCACTGCATCCATGGCTCCCTTCGCTTATTTTCTCGAAcgGAAAACAGTTCCCAAGTTGACATGGCCAATTATGTTCCAGATATTTTTATCTTCCTTAACTGGAATGACAGGAAACCAGGTATTCTACTTTGTGGGGTTAAAATATGCATCCGCCACAATTGCATGTGCATTGAACAATCTGATCCCAGCTTTGACTTTCATCCTTGCCGTCCTCTTCAGGCGAAAGTGTTAGGGACTATTCTGTGTGTGGGTGGAGCCTTGTTATTATCGCTGTACCACGGAGAAAGCATTGGTTTGGGCGAATCAAAAATTCACTGGAAATATGCAGAGAAGATGATGCAGCAAGGCGAAGACTCTGACTCTTCCACCAAAACAAACTTGCTTCTAGGTCCTTTCATGATAATTCTGAGTACTATTTCTTGGTCACTATGGTTCATTATCCAAGCAAAAATGAGCGCCCATTTTCCAGCTCCATACACGAGCAGTACGTATATGTTCTTGTTGGCAAGCATAGAATGTACGGTCATTGCCTTATGTTTTCAACACAGCCCCTCCGCTTGGTCACTCACCAGTACTATTAGACTTACTTCCACGCTTTATgcgGGGATTTTATGTACTGGTCTTGCATATTCCCTCATGTCCTGGACTATTCAGAGGAAAGGTCCTCTTTATACCTCTGTGTTCACTCCCTTGCAGATTGTATTGGCGGCCATTCTCAGCTGGGCCCTGCTTCGTGAGAAATTATATGTTGGAACTGCTGTAGGGTCTCTCTTGATTGTTGTCGGGCTCTATTCTGTTTTGTGGGGAACCAACAAAGATGAGATGAATATGGAAGACGCACAAGCTAATGCTATGAATCAGAATGAGAGCGAGAAAGATGTCAAGAACGACGTCGAATCGCAGGCTCGCATGCCAGAATGTCAATA 1181 0.4318 MRPGQCTMDFLICSYISHAYNLTSSLFISRKEKRVKTRANGKRALSILGHVLCSTGLCRDDHYLKACNRIGHEPSGPSRLSTNPCHCIHGSLRLFSRTENSSQVDMANYVPDIFIFLNWNDRKPGILLCGVKICIRHNCMCIEQSDPSFDFHPCRPLQAKVLGTILCVGGALLLSLYHGESIGLGESKIHWKYAEKMMQQGEDSDSSTKTNLLLGPFMIILSTISWSLWFIIQAKMSAHFPAPYTSSTYMFLLASIECTVIALCFQHSPSAWSLTSTIRLTSTLYAGILCTGLAYSLMSWTIQRKGPLYTSVFTPLQIVLAAILSWALLREKLYVGTAVGSLLIVVGLYSVLWGTNKDEMNMEDAQANAMNQNESEKDVKNDVESQARMPECQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03219 393 Pfam EamA-like transporter family 214 352 IPR000620 GO:0016020|GO:0016021
Bva04g03219 393 PANTHER WAT1-RELATED PROTEIN 158 387 - -
Bva04g03219 393 MobiDBLite consensus disorder prediction 369 393 - -
Bva04g03219 393 Coils Coil 362 382 - -
Bva04g03219 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 356 - -
Bva04g03219 393 PANTHER WAT1-RELATED PROTEIN 158 387 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03219 Bva-Chr4 26172028 26174226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03219 158 390 Nodulin-like Gene Family AT1G09380 53.419 6.38e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03219 - - gmx:100801512 287.345