Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03218 ATGGCAACTGGGCTGTTTCCTTTCTTGGCCATGTTCATTGTGCAAGCGGGCTATGCAGGGATGAATATTACCTCAAAGCTTGCAATTGAATCCGGCATGAACCCTCTTGTCCTAGTCGCTTATCGTCAACTCTTTGCCACTGCATCCATGGCTCCCTTCGCTTATTTTCTCGAACGGAAAACAGCTCCCAGGTTGACAAGGACAATTATGTTTCAGATATTTTTATCTTCCTTGACTGGGGTCACGGGAAACCAGGTATTTTACTTCGTGGGGCTAAAATATACAACCGCCACAATTGCATGTGCATTGACCAATTTGCTCCCAGCTTTCACTTTCGTCCTTACTGTCCTCTTCAGACAAGAGAAATTGAGAATCAAGACGATGGCTTCACATGCAAAGGTGTTAGGGACCATTCTGGGTGTTGGTGGAGCCTTGTTGCTTTCATTGTACCACGGAGAAAACATTGGTTTGGGCGAATCAAAAATTCACTGGAAATATGGAGAGAAAATGCAAGGCACAGACTCTTCCGGCGCCAAAACAAATTTGCTTCTTGGCCCTTTCATGGTATTTCTGAGTGCTCTTTCTTGGTCAATATGGTTCATTATCCAAGCAAAAACGAGCAGCTTGTATCCAGCTCCTTATACGAGCAGTACGTATATGTGCTTGTTGGCAAGCATAGAATGTGCGGTCATTGCCTTATGTTTTCAACACAACACCTCTGCTTGGTCACTCACCAGTACTATTAGGCTTACTTCTTCGCTTTATgcgGGGATTATATGCACTGGTCTAGCATATTGCCTCATGTCATGGTCTATTCAGAGGAAAGGTCCTCTTTACGTCGTCGTATTCACTCCCTTGCAGCTTGTCCTGACGGCTATTCTCAGCTGGGCTCTGCTTCGCGATAAATTATACGTCGGAACTGCTGTAGGGTCTGTCATTATTGTTGTCGGGCTCTATTCTGTTTTGTGGGGAAAGAACAAAGAAGCGAATGTGGAGGAAGCCGCCAAAATGACACAAGCCGATCCTATGAATGACAACGACAAGGAAGTGAAGAACGACGTCGAATTGCAAGATCACATGCCATA 1085 0.4488 MATGLFPFLAMFIVQAGYAGMNITSKLAIESGMNPLVLVAYRQLFATASMAPFAYFLERKTAPRLTRTIMFQIFLSSLTGVTGNQVFYFVGLKYTTATIACALTNLLPAFTFVLTVLFRQEKLRIKTMASHAKVLGTILGVGGALLLSLYHGENIGLGESKIHWKYGEKMQGTDSSGAKTNLLLGPFMVFLSALSWSIWFIIQAKTSSLYPAPYTSSTYMCLLASIECAVIALCFQHNTSAWSLTSTIRLTSSLYAGIICTGLAYCLMSWSIQRKGPLYVVVFTPLQLVLTAILSWALLRDKLYVGTAVGSVIIVVGLYSVLWGKNKEANVEEAAKMTQADPMNDNDKEVKNDVELQDHMP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03218 361 MobiDBLite consensus disorder prediction 336 361 - -
Bva04g03218 361 MobiDBLite consensus disorder prediction 342 361 - -
Bva04g03218 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 150 - -
Bva04g03218 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 327 - -
Bva04g03218 361 Pfam EamA-like transporter family 9 148 IPR000620 GO:0016020|GO:0016021
Bva04g03218 361 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Bva04g03218 361 PANTHER WAT1-RELATED PROTEIN 6 357 IPR030184 GO:0016021|GO:0022857
Bva04g03218 361 PANTHER WAT1-RELATED PROTEIN 6 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03218 Bva-Chr4 26168769 26171320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03218 3 355 Nodulin-like Gene Family AT1G09380 55.241 2.86e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03218 - - gmx:100802059 477.633