Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03208 ATGGGTGCTGATCTTAATGCTGAATTATCGAAGAAAACTCCCATTTTTGGTCTTAAGGTTTGGGAGATAATTGGGATTGCAGTtggattatttattataattatcctCTCTGTGCTCTCACTTTGTCTTACTTCACGgaagaaatcaagaaaagCTAAAGACAGGATACCCCTAAGTCAAATACCCACTGTCTCAAAGGAAATCAAGGAAGTGCGGGTTGAGCGAGTGTCAGCAAATGGATTTGCGCCTCGTGAAGGAGTACTTCTCACAATACATGACAAATCTAGTGACAAAGATTCAGACAAAGTTATGGTTCATTTGGATGTGGGGAAGATGAAGAATGGGGATAATGGCAGTCATTCAGGTTCATTTCATCACTTTGAGAAAGATGGGTGTGGGTCACAGTCAGGTGAAGATGGGAGCTCTGGTACAGTTACAGTGTATAAGCCCTCTTCTTCATATCCTATAACAGCTCCTTCCCCTCTGTCTGGCCTTCCAGAGTTCTCTCATTTGGGTTGGGGCCACTGGTTTACACTGAGGGATCTTGAACTTGCTACAAACAggttttcaaaagaaaatgtgctTGGTGAGGGTGGGTATGGAGTTGTTTATCGTGGAAAGTTGATCAATGGAACTCCAGTGGCAGTTAAAAAGATACTAAACAATATAGGTCaagcagaaaaagaatttagGGTGGAAGTTGAAGCTATTGGCCATGTTCgacataaaaatttagttcGCCTTTTGGGATACTGCATTGAAGGGATTCATAGGATGTTAGTCTATGAATATGTTAATAATGGAAACTTAGAGCAGTGGCTTCATGGAGCTATGCGTCATCATGGGTATCTCACATGGGAAGCCCGTATCAAGATTCTCCTTGGCATGGCTAAAGCTCTTGCATATTTGCATGAAGCAATTGAGCCAAAGGTTGTACACCGAGATATCAAGTCAagcaatatattaattgatgatGACTTCAACGCCAAGGTCTCTGATTTTGGCCTGGCCAAGCTGCTGGGTGCTGGAAAGAGTCATGTCACAACTCGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTTTGAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTGTGCTTTTAGAAGCAATTACTGGAAGAGATCCTGTTGATTATGGCCGTCCAGCTCATGAAGTTAATCTGGTTGATTGGTTGAAGATGATGGTCGGAAGCAGGCGATCAGAAGAAGTTGTAGACCCAAACATTGAGGTGAGACCATCAACAAGAGCTTTAAAACGAGCCCTCTTAACTGCTTTGAGATGTGTGGATCCAGATTCTGAGAAAAGACCCAGGATGGGTCAAGTTGTACGTATGCTCGAGTCAGAGGAATACCCCTTACCGAGAGAGGACCGAAGGCACCGAAGAAATCGAGAAGGTAACAATGAAATTGAATCCCAGAGGGAATATTCTGACACAGACAGGAGTGAAAATCAGGGATCTAGATCAGAGGGCAGAGGGTA 1523 0.4071 MGADLNAELSKKTPIFGLKVWEIIGIAVGLFIIIILSVLSLCLTSRKKSRKAKDRIPLSQIPTVSKEIKEVRVERVSANGFAPREGVLLTIHDKSSDKDSDKVMVHLDVGKMKNGDNGSHSGSFHHFEKDGCGSQSGEDGSSGTVTVYKPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGKLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGIHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGMAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAHEVNLVDWLKMMVGSRRSEEVVDPNIEVRPSTRALKRALLTALRCVDPDSEKRPRMGQVVRMLESEEYPLPREDRRHRRNREGNNEIESQREYSDTDRSENQGSRSEGRG 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03208 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Bva04g03208 507 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 504 - -
Bva04g03208 507 PANTHER OS01G0323000 PROTEIN 3 504 - -
Bva04g03208 507 MobiDBLite consensus disorder prediction 447 507 - -
Bva04g03208 507 CDD STKc_IRAK 195 461 - -
Bva04g03208 507 ProSiteProfiles Protein kinase domain profile. 189 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03208 507 Gene3D Transferase(Phosphotransferase) domain 1 265 476 - -
Bva04g03208 507 Pfam Protein kinase domain 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03208 507 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03208 507 SUPERFAMILY Protein kinase-like (PK-like) 173 468 IPR011009 -
Bva04g03208 507 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Bva04g03208 507 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03208 Bva-Chr4 26119748 26123608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03208 166 463 Trihelix Transcription Factor Family AT1G70460 51.485 4.13e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bva04g03208 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03208 - - vvi:100261416 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03201 13 22356058 22360462 Bva04g03208 04 26119748 26123608 BWGD
Bva13g03201 13 22356058 22360462 Bva04g03208 04 26119748 26123608 ECH
Bva04g03208 04 26119748 26123608 Bva04g03208 04 26119748 26123608 ECH