Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03195 ATGGCGAATCTTTTGTGGCTTGGCATTGTATTGGGACTTGTTTTCAGCAACTGGGTTGATGGGTTTGAAGGCTATCACTTCAATGAAACCGAGTTGTCTTTGTTGGAGGCTCATGAAGCATCCTTGCTGGGTGGGAATCCTTTAATGGTAGGACTCACCCTCATTCAAGCTGCTGCTGCTAAAGGAGCAGTTTGCTTGGATGGAACATTACCTGGTTATCATTGGCATCGAGGATATGGATCAGGAGCAAACAGCTGGATTATTAATTTAGAGGGAGGTGGATGGTGTAATAATGTTAGAACATGTGTATTCCGCAAGACAACTCGGCGTGGATCTTCAAGATTCATGGAAAAGGAGATACCCTTTACAGGAATATTAAGCAATAATGCTCAAGAAAATCCAGATTTTTTCAACTGGAATAGAGTGAAGCTTCGTTATTGTGATGGTGCCTCTTTTACTGGGGATAGTGAACATACGGCTGCACAACTGCAATTCAGAGGACAACGCATTTGGTTGGCTGCAATGGAAGATTTGATGTCAAAGGGATTGCGTCATGCTGAGCAGGCTCTTCTTTCTGGATGCTCTGCCGGTGGTCTGGCTACTATTATACACTGTGATGAGTTCCGAGGCCGATTTCCAAGTACTACTAAAGTCAAGTGTTTAAGTGATGCTGGTTTATTTCTAGATGTCGCTGATGTGTCTGGTGGGCGTACCCTCAGGAATATGTACAGTGGTGTTGTAGGGTTACAGGGGGTGCAGAAAAATCTGCCACGCATTTGTCTTAACCACCATGATCCCACTTCGTGCTTCTTCCCTCAGAACTTGATTGCCAGTGTCAGAACTCCGCTCTTTATCCTCAATGCTGCCTATGATTCATGGCAGATCCAGTCCAGTATAGCTCCTCCATCAGCAGATCGCCATGGCTATTGGCGTGATTGTAGATTGAACCATGCAAAATGTACAGCATCACAAATCCATTTTCTGCAAGGATTCAGGAACCAAATGCTGAATGCTGTGAAAGACTTCTCAAGATCGAGTCAGAATGGATTGTTTATAAATTCATGCTTTGCTCACTGCCAATCTGAGAGGCCAGATACATGGTTTTCTGACGATTCTCCTGTCATTGGGAACAAGCCAATTGCTATTGCTGTTGGTGACTGGTATTTCGACCGAGCAGGTGTTAAGGCCATTGATTGTCCTTATCCTTGCGACAATTCATGTCACAATCTGGTTTTCAAATG 1241 0.4424 MANLLWLGIVLGLVFSNWVDGFEGYHFNETELSLLEAHEASLLGGNPLMVGLTLIQAAAAKGAVCLDGTLPGYHWHRGYGSGANSWIINLEGGGWCNNVRTCVFRKTTRRGSSRFMEKEIPFTGILSNNAQENPDFFNWNRVKLRYCDGASFTGDSEHTAAQLQFRGQRIWLAAMEDLMSKGLRHAEQALLSGCSAGGLATIIHCDEFRGRFPSTTKVKCLSDAGLFLDVADVSGGRTLRNMYSGVVGLQGVQKNLPRICLNHHDPTSCFFPQNLIASVRTPLFILNAAYDSWQIQSSIAPPSADRHGYWRDCRLNHAKCTASQIHFLQGFRNQMLNAVKDFSRSSQNGLFINSCFAHCQSERPDTWFSDDSPVIGNKPIAIAVGDWYFDRAGVKAIDCPYPCDNSCHNLVFK 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03195 413 Pfam Pectinacetylesterase 47 392 IPR004963 GO:0016787
Bva04g03195 413 PANTHER NOTUM-RELATED 3 413 IPR004963 GO:0016787
Bva04g03195 413 PANTHER PECTIN ACETYLESTERASE 3 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03195 Bva-Chr4 26041212 26044853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03195 1 413 Carbohydrate Esterase AT1G57590 65.721 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03195 K19882 - gmx:100788448 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03195 04 26041212 26044853 Bva13g03183 13 22263430 22267206 BWGD
Bva13g03183 13 22263430 22267206 Bva04g03195 04 26041212 26044853 ECH
Bva04g03195 04 26041212 26044853 Bva04g03195 04 26041212 26044853 ECH