Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03175 ATGGGTAACGGCACTTCTCGTGTTGTTGGCTGTTTAGTGCCATTTAATGGCAAAAGTGGGGTTGATTTGGAGTTTCTAGAGCCACTAGACGAAGGATTAGGCcattctttttgttatgtGAGGCCATCAATTTTTGAATCTCCTGCCATTACCCCATCTAACTCTGAGAGGTTCACAGTTGATTCGAGTACCCTTGATTCTGAAACTTTAAGTGGATCATTTAGGCATGATAGCATAGAAGATAACCCTGGAATAAACAAGCTAGGCAAGAATTTCCCAGAAACCACATTCAAGACGATTTCAGGGGCTTCAGTTAGTGCAAATGTTTCTACTGCAAGGACTGGTAACCAGAATGCATTATTTGTTAGTGATGCCCTAGAGCCTGCTGCATCATTTGAGGGAACCTCCTCATTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGCTCTGGACCTCTGAATGGTTTCATGTCTGGACCTCTCGAGAGAGTTTATGCTTCAGGTCCATTGGATAGGGGAGGTGGTTTTATGTCTGGGCCTATAGAGAAAGGAGTTATGTCCGGTCCTCTTGATGCCACAGACAAATCCAACTTTTCTGCACCCCTTGCACGCAGTCGTCGAAGGCCACGCCTCCAACATCTCATGAGGAGCGTGAGTGGTCCGATGAGAAGCACTTTTTCTAGAACCTTCTCTAAGAATTCTTTGGGTGGAAGTTGGATGCAACGGTTATTCTTTCACCCGGTTACTCAATTGGGTTGGCATTCTAAAGATGCAAAGTTTCGAACTGAAGCCCCTAGAAACTGCATTGAAGTTGGGCCAGCTGAAGGGGAGTataaacacacacacaatTTGCAGTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTTCAACTAGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCACCTGATTTTGTGATGAGCCATCTTTATAGATTTATTGATAAGGAACTGGAAGGATTGCTTTGGGTTTATGAAGATAATCCTGTAGATCCACTTAAACCTGAAGTCCCTAGAACTGGAAATACTGACGATGCCCCAGAACACTGTGGAGAGGACCTGTCAAATGCTAATACCAATTCAAACCAAGAAATCTCTTGCTGTTTAGCTGCTGCTTCAGTAGTTGTGAGGGATCAATCATCTAACAGTGAGATAGTTGAGGAGCATGTTGAAAAGCAATTAACTTATTCTGGAAATCCCAGTATCTCAGGTGACATTCCTGCTTCTGTTTCACTCGGTCACTTGTCTGGTCAAGGTAGAAAAAGTGTGCGGCTTTATGAGCTACTTCAGTTGGAATCTTGGCATGAACGGGGTTTCTTGTCAGTCTCAGAACAAGGTAAAAATTCACCGTTTTCTGGGAAATCATCACAAGAGACGCAGATGAGATCTTGCTCATCTGATGCAAAAGAATATAGTTCCAGCTGTCAGGATGACTGTCCCACTACTTCTGGAGAAAATGGAGCCATTGGGTCTGAATCAATTAATAATGGGTTAGGGACTGCTTTTTCTGTTTCAGCACAAAGACAGGATTCAAGAAAGTCATTTATTGGtacaaaaatcagaaaaatgtACAGGAAGCAGAAGTCCTTGCGTAAGAAGCTTTTCCCGTGGAGTTATGATTGGCATAGAGAGGAAACTTGTGTTGATGAGAAAATAGTGGAAGCGTCAGGACCTATTAGAAAATGCAAATCTGGAGTAGCAGATCATGAAGCGGTTTTAAGAGCAATGACCCGGGCTCTAGAAAGAACCGAAGAGGCATACATGGAAATGGTGGAAAAAAATCTGGACAAAAATCCAGAGCTTGCTTTAATGGGGTCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTCGGAGATAGCCGTGTGATCTTGGctcaagaaagaccaaatgatCGTCATCCAAATCCATGTTTTGCGAAGGATGATGCGAGGCATAGAAATCGATCTAGAGAGTCATTAGTGCGCATGGAGCTGGATAGAATTTCAGAGGAGTCCCCGATTCACAATCAAAACAGTCATCTTAACAAGATGAACAAAAATAGGGAGATATCCGTTTGCAGATTAAAAATGAGGGCTGTTCAGCTTTCCACAGATCACAGCACAAGTATTGAAGAGGAAGTTTTTAGAATAAGGGCAGAACATCCTGACGATAATGAAGCTGTGTTGAATGATCGAGTAAAAGGACAACTGAAAGTTACCAGAGCGTTTGGTGCTGGATTCCTGAAGAGGCCATCCTTCAATGAAGCTCTACTGAAGATGTTTCGGGTTGATTACGTGGGCGCTGCACCTTACCTAAGTTGCACTCCATTTGTTGTTCATCACCGACTTTCCTCCAGTGATCGGTTCTTGGTGCTATCCTCGGACGGGCTTTATCAATATTTCAGCAATGAAGAGGTGGTTGCTCATGTCACATGGTTCATGGAAAATGTCCCCGAAGGTGATCCTGCACAATACCTCATTGCAGAGCTTCTCTTCCGTGCTGCCAAAAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTCATGGAGATAGACGTAAATATCATGATGACGTCTCTGTTATGGTGGTTTCACTAGAAGGAAGGATTTGGAGATCATCtggata 2681 0.4248 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHDSIEDNPGINKLGKNFPETTFKTISGASVSANVSTARTGNQNALFVSDALEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERVYASGPLDRGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARSRRRPRLQHLMRSVSGPMRSTFSRTFSKNSLGGSWMQRLFFHPVTQLGWHSKDAKFRTEAPRNCIEVGPAEGEYKHTHNLQWAHGKAGEDRVQLVLSEEQGWLFIGIYDGFSGPDAPDFVMSHLYRFIDKELEGLLWVYEDNPVDPLKPEVPRTGNTDDAPEHCGEDLSNANTNSNQEISCCLAAASVVVRDQSSNSEIVEEHVEKQLTYSGNPSISGDIPASVSLGHLSGQGRKSVRLYELLQLESWHERGFLSVSEQGKNSPFSGKSSQETQMRSCSSDAKEYSSSCQDDCPTTSGENGAIGSESINNGLGTAFSVSAQRQDSRKSFIGTKIRKMYRKQKSLRKKLFPWSYDWHREETCVDEKIVEASGPIRKCKSGVADHEAVLRAMTRALERTEEAYMEMVEKNLDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNPCFAKDDARHRNRSRESLVRMELDRISEESPIHNQNSHLNKMNKNREISVCRLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNEAVLNDRVKGQLKVTRAFGAGFLKRPSFNEALLKMFRVDYVGAAPYLSCTPFVVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03175 893 PANTHER PROTEIN PHOSPHATASE 2C 11 893 IPR015655 GO:0004722|GO:0006470
Bva04g03175 893 MobiDBLite consensus disorder prediction 461 481 - -
Bva04g03175 893 Pfam Protein phosphatase 2C 709 855 IPR001932 -
Bva04g03175 893 Gene3D - 463 890 IPR036457 -
Bva04g03175 893 ProSiteProfiles PPM-type phosphatase domain profile. 277 884 IPR001932 -
Bva04g03175 893 SUPERFAMILY PP2C-like 290 885 IPR036457 -
Bva04g03175 893 Gene3D - 257 422 IPR036457 -
Bva04g03175 893 PANTHER PROTEIN PHOSPHATASE 2C 32 11 893 - -
Bva04g03175 893 Coils Coil 584 611 - -
Bva04g03175 893 SMART PP2C_4 277 882 IPR001932 -
Bva04g03175 893 CDD PP2Cc 586 884 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03175 Bva-Chr4 25939747 25945048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03175 1 893 PP2C-type Phosphatase Gene Family AT2G46920 64.967 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03175 - - gmx:100786856 1433.31