Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03171 ATGACAACGAAGCTGATTTCAATAGCCATTGCTTTTGCTTGCTTTATTTCTGGGGTTATCTGCGGTGGATCTGAGGGAGATTCTGCGCTTTCTTACCTAGAAAACGATGTCGTAATGGCAAGATCTTCCCCCTCGCCCCAACCTCTCACGGTCGGCCTCACTCTCGTTCGAGGAGCTGCTTCTAAAGGAGCTGTCTGTTTGGATGGGACACTTCCTGGTTACCATTTGCATCGGGGATTTGGATCTGGTGCAAATAGCTGGCTCGTTCAATTGGAGGGAGGTGGGTGGTGTAATACTATTAGGAATTGTGTCTTTAGAAAAACCACTCGTCGTGGGTCTTCAAAATACATGGAAAAGCAATTACCATTCACGGGACTATTGAGCAATAAAGCAGAAGAAAATCCAGATTTCTTCAACTGGAACAGAGTCAAAGTACGGTATTGTGATGGGGCTTCCTTCAGTGGAGATAGTCAGAATGAGGCTGCACGGCTTCAATTTCGAGGACAGAAAATATGGGTAGCTGTTATGGAGGAGTTAATGGCCAAGGGAATGCAGAATGCCAATCAGgcTCTTCTTTCTGGGTGCTCTGCTGGTGGTCTGGCAGCAATAATACATTGTGATGAGTTCCGAGGGTTGTTTCCAAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGATTTTTCCTTGATGcAATTGATGTATCTGGTGGACACACTTTGAGGAATCTGTTTGATGGTGTCGTTCACTTACaggaaGTACAAAAGAATCTGCCAACAAGTTGTCTCAACCACATGGATCCTACTTCGTGCTTCTTTCCTCAGAATTTGATTGAACATGTCCAGACTCCATTGTTTCTACTAAATGCAGCCTACGATGCATGGCAGCTACAAGCCAGCTTAGCTCCACCTTCAGCCGATCCCAATGGCTCATGGCATAATTGCAAATCAAACCATGCAAGTTGTAACTCTTCTCAGATTCAATTCCTCCAAGACTTCAGAAATCAAATGCTTAATGGCATCAAAGATTTCTCAAGGTCAGCTCAAACTGGATTATTCATAAATTCCTGTTTTGCTCACTGTCAATCTGAGAGACAGGACACATGGTTTGCTGATGACTCTCCCCTTATTAGGAACAAGCCGATTGCAATTGCCGTTGGAGACTGGTACTTTGATCGACAAGGTGTCAAAGCTGTTGACTGTGCTTACCCTTGTGACAAGACCTGCCATAATCTGGTCTTCAACGATGATACATCTGCCCCGGTATTTTCCCAGCCCACAAGTGATGATACGCTAACGCTCCCCATGATATATTCCAAGTCTACAAGTTA 1328 0.4413 MTTKLISIAIAFACFISGVICGGSEGDSALSYLENDVVMARSSPSPQPLTVGLTLVRGAASKGAVCLDGTLPGYHLHRGFGSGANSWLVQLEGGGWCNTIRNCVFRKTTRRGSSKYMEKQLPFTGLLSNKAEENPDFFNWNRVKVRYCDGASFSGDSQNEAARLQFRGQKIWVAVMEELMAKGMQNANQALLSGCSAGGLAAIIHCDEFRGLFPKSTKVKCLSDAGFFLDAIDVSGGHTLRNLFDGVVHLQEVQKNLPTSCLNHMDPTSCFFPQNLIEHVQTPLFLLNAAYDAWQLQASLAPPSADPNGSWHNCKSNHASCNSSQIQFLQDFRNQMLNGIKDFSRSAQTGLFINSCFAHCQSERQDTWFADDSPLIRNKPIAIAVGDWYFDRQGVKAVDCAYPCDKTCHNLVFNDDTSAPVFSQPTSDDTLTLPMIYSKSTS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03171 442 PANTHER PECTIN ACETYLESTERASE 4 424 - -
Bva04g03171 442 Pfam Pectinacetylesterase 47 393 IPR004963 GO:0016787
Bva04g03171 442 PANTHER NOTUM-RELATED 4 424 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03171 Bva-Chr4 25920692 25924702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03171 6 419 Carbohydrate Esterase AT3G62060 65.485 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03171 K19882 - gmx:100785270 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03171 04 25920692 25924702 Bva13g03154 13 22112955 22117775 BWGD