Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03161 ATGGAAAACCAGCACCGCCGTGAATTGACCTTCTTAAGCTCCGGCGGCGGCGACTTTCTCCGCCAGCGGTTTGATCGAGTATCCGAGAACTCCTCCGATGAACATAGCGATCCAGCTCCTCCCATCAAAGAAATGGATTTCTTCTCAGGTTCAGGTAATAAAGTTTATGAAACCAAGAATCATGACCGGGCTCAAGATCATGACCATGACAACACCAATAACCATGGATCAGCAGCAACTACCTTATCTGATCGGCGTGTAAATACGGGGCTCAATTTAATATCTGAAAGTTCCGGAACATTAAGAGTGGCAAGCAATGAAAAGCCCAATACACAACTAAGCACACTTCAAGGTGAATTACGCCGACTAAATGAGGAGAATGGGAAGTTGAAAAATATGCTGGATCAGATCACCAAAAGTTATGGCCAATTACAGGCTCAATTGATGATGGCTTTGCAAAAGCAAAGGGCACAGGTTCAAGCAAAGGACATTTTGTCGCCCCAACAGTTAATGGACCCACGACCGTCAACCAAATTAGAGGTGAATGTGAATGGGAGTGATCCCTCGGTTTCTGATGACAAGACACATAATGAAGAGCCATCAGCTTCTAACACTATGGAGGTAATGTCAAAACATGATCACCATCCTATGATAAAGGCTGTTGGAAGGAAGCAACAGCAGCATGAGAGTCCTGATCAAGATGCTCTTGACCGCTCCTCTCAAAGTTGGGGCTCTTCCAAAAGTCCAAAGTTAGAAGAACCCAAAATTGACCAAGAACAGGTTGCTGAGATTCCTTTCAGAAAAGCCAGGGTTTCCGTACGAGCAAGATCAGAAGCTTCTCTCATTAGTGATGGCTGCCAATGGAGGAAATATGGCCAAAAAATGGCCAAGGGTAACCCTTGTCCTCGTGCCTACTTCCGTTGCACTATGGCCGTAGGATGCCCAGTGCGTAAGCAGGTGCAGAGATGCGCGGAGGACAAGAGTGTACTAATAACAACTTACGAAGGCAACCACAACCACCCTCTCCCTCCGGCAGCCACCGCCATGGCTAATACTACATCGGCAGCGGCGGCTATGCTCCTATCAGGTTCAACTACGAGCAAAGATGCCTTAACTAATTCTGTTGGCTACTTCTCCTCGATGCCCTATGCATCTATGGCAACCCTATCAGCCACTGCACCATTCCCCACCATCACACTTGACTTGACACAGAACCCCACCGGAGCCATGCAGCTGAACCGTGTGCCGCCTTCTGGGACCAACTTTACTCTGCCTTTGCATGGTGGTCCACAGCTACTAGGACACCCGGCCATGTTCTTACCTCAAAATATACCAGCAATGGCTTTGGCCCAACTAGGGCAACGTCAAGTACAGCCTTCTTCTATGATTGAGACTATGAGCGCAGCCATTGCTTCCGATCCAAATTTCTCTGCAATACTGGCAGCAGCAATCTCATCAATCATTGGGACACCCAGAAGCAGTACTAATGGAAGTAGTAATAATAATGGTGGGAGCGCTGTTTCGCTTAACGGGATATCTGTATTGCCCGAGTCACCGCAGCTTCCTCACTCATGCACCACATTCTCTGCCAAGTA 1595 0.4784 MENQHRRELTFLSSGGGDFLRQRFDRVSENSSDEHSDPAPPIKEMDFFSGSGNKVYETKNHDRAQDHDHDNTNNHGSAATTLSDRRVNTGLNLISESSGTLRVASNEKPNTQLSTLQGELRRLNEENGKLKNMLDQITKSYGQLQAQLMMALQKQRAQVQAKDILSPQQLMDPRPSTKLEVNVNGSDPSVSDDKTHNEEPSASNTMEVMSKHDHHPMIKAVGRKQQQHESPDQDALDRSSQSWGSSKSPKLEEPKIDQEQVAEIPFRKARVSVRARSEASLISDGCQWRKYGQKMAKGNPCPRAYFRCTMAVGCPVRKQVQRCAEDKSVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTTSKDALTNSVGYFSSMPYASMATLSATAPFPTITLDLTQNPTGAMQLNRVPPSGTNFTLPLHGGPQLLGHPAMFLPQNIPAMALAQLGQRQVQPSSMIETMSAAIASDPNFSAILAAAISSIIGTPRSSTNGSSNNNGGSAVSLNGISVLPESPQLPHSCTTFSAK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03161 531 Pfam WRKY DNA -binding domain 284 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03161 531 Gene3D WRKY domain 267 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03161 531 Coils Coil 113 140 - -
Bva04g03161 531 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 37 530 - -
Bva04g03161 531 SMART WRKY_cls 282 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03161 531 MobiDBLite consensus disorder prediction 208 235 - -
Bva04g03161 531 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 37 530 IPR044810 GO:0003700
Bva04g03161 531 MobiDBLite consensus disorder prediction 165 190 - -
Bva04g03161 531 MobiDBLite consensus disorder prediction 1 83 - -
Bva04g03161 531 ProSiteProfiles WRKY domain profile. 277 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03161 531 MobiDBLite consensus disorder prediction 165 259 - -
Bva04g03161 531 MobiDBLite consensus disorder prediction 56 73 - -
Bva04g03161 531 SUPERFAMILY WRKY DNA-binding domain 275 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03161 531 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03161 Bva-Chr4 25865193 25868218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03161 4 529 WRKY Transcription Factor Family AT4G01720 40.250 1.46e-91 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva04g03161 WRKY 6.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03161 - - gab:108458488 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03161 04 25865193 25868218 Bva13g03142 13 22047876 22050832 BWGD