Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03151 ATGGAACAagaatcttttctttccagCCAAACAAGGTCCCAACTGCAACCCATCATTCAGCATCGTGATTTATCCTTCTCCGCTTCTCAGTCCTTGGATGACCTTGTCTTTATTCAGGAAATCCAACGCGAGCAACAATCTTCAGGTGGTCAATTATTGGCCCCCAATGCCCCCAAGAAGAAACTGTGTCGTTGCAAGACTGCCCCTGCCATGGTTATCTTTCGAGAGCTCAAACCCAACACACCTGAAAGCCCCAAACCACAGCCCGCGTCTAGTTCCATCATCAGGCAAGGTATTTGCTTGCTCATCATATATCTTTCGATTGGAGTCGCCATATACTCTTTCAATAGGGATCATTTTTCGGGCGTAGAGACACACCCAGTAATAGATGCTCTTTACTTCTGTATAGTCACCATGTGTACAATTGGCTATGGAGATATTGCTCCCTTAACCCCAGTAAGCAAGGTGTTTGCTTGTATTTTTGTATTGGTGGGTATCGGATTCATTGACATTTTGCTTAGTGGGCTTGTCAATTATGTCCTAGATTTGCAAGAAAGCATGATCCTAACTGGCCTTCAAATCGGTGCTCAACGACATCAAGAAGGATTCTCTGCAAGAAATTACATAGTTGATGTGGCAAAGGGGAGAATGAGAATCAGATTGAAAGTGGGTTTGGCACTTGGAGTGGTGGTTTTGTGTATTGGGGTTGGAAGTTTGGTGTTGTACTTTGTGGAGGATTTGAATTGGATTGATTCAATTTACTTATCGGTTATGTCTGTAACCACAGTTGGGTATGGAGATAGAGCTTTTAAGACCCTCCCTGGGCGGCTCTTTGCCGCTATTTGGCTCCTCTTTTCCACATTGATGGTGGCTCGGGCTTTCCTATATTTGGCGGAGGCCAGAATTGATAAAAGGCACCGCAGAATCGCCAAGTGGGTTTTGCATAGGGATATGACTGTCGATGATTTGCTTGCTGCAGATATCAATAACACCGGTTTCATTAGCAAGTCAGAGTATGTGATATTCAAGCTGAAAGAGATGGGAAAAATACGGGAGAAAGACATACTGCAAGTCTGTGACCAATTCAGCAAGCTTGATCGCACAAATTGTGGCAAGATAACATTGCTTCATATCTTGGAGGGCCGGCCGTG 1151 0.4387 MEQESFLSSQTRSQLQPIIQHRDLSFSASQSLDDLVFIQEIQREQQSSGGQLLAPNAPKKKLCRCKTAPAMVIFRELKPNTPESPKPQPASSSIIRQGICLLIIYLSIGVAIYSFNRDHFSGVETHPVIDALYFCIVTMCTIGYGDIAPLTPVSKVFACIFVLVGIGFIDILLSGLVNYVLDLQESMILTGLQIGAQRHQEGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGVGSLVLYFVEDLNWIDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLHRDMTVDDLLAADINNTGFISKSEYVIFKLKEMGKIREKDILQVCDQFSKLDRTNCGKITLLHILEGRP 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03151 383 PRINTS Two pore domain K+ channel signature 137 165 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva04g03151 383 PRINTS Two pore domain K+ channel signature 261 270 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva04g03151 383 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 53 378 - -
Bva04g03151 383 SUPERFAMILY Voltage-gated potassium channels 93 180 - -
Bva04g03151 383 SUPERFAMILY Voltage-gated potassium channels 214 320 - -
Bva04g03151 383 Pfam Ion channel 231 299 IPR013099 -
Bva04g03151 383 Pfam Ion channel 101 180 IPR013099 -
Bva04g03151 383 Gene3D - 88 199 - -
Bva04g03151 383 Gene3D - 205 320 - -
Bva04g03151 383 ProSitePatterns EF-hand calcium-binding domain. 327 339 IPR018247 -
Bva04g03151 383 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 53 378 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03151 Bva-Chr4 25808882 25810986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03151 13 383 Ion Channels AT4G01840 64.171 2.15e-164 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03151 K05389 - gmx:100801488 538.11