Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03138 ATGGACGACTGTTGTGCTGTTTGCGCTGAACCTTTGGAATGGGTCGCATACGGCCCCTGTTTGCACCGAGAGGTGTGCTCGACATGCGTCGCTCGTCTCCGTTTCATTTGTGAGGATAGCCGTTGCTGCATCTGCAAGACTGAGTGCAACGTCGTGTTCGTGACTAAGGCTCTAGGGGATTATACAAGGATGATCAGTGACTTTTCAGTCCTGCCATCTGATGTAAGAGAAGGTTATGTGGGATCATATTGGTTCCATGAAGATacaaattcttattttgatgatGTGGACCAGTACAAGATGATCAAGGCTATGTGCAGGCTTTCATGCTCTGTATGTGACAAGATGGAGGAGCAGCCCCAAGATGCCGCAAAGCGCCGACAAAGGTTTAGGAATATAGAGCAGCTAAAGGGTCACTTATTCCACCGTCATAGGTTGCTTATGTGCCGTTTATGTTTCGAGGGAAGAAAGGTATTTATATGTGAACAGAAGCTGTATACTAGAGCACAATTGAATCAGCATATAAGCACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCCATGTGTGAATTTTGTCGGACCCCATTTTATGGGGACAATGAATTATACACACATATGTCTACAGAACATTATACTTGTCATATATGTCAAAGgcAGCATCCAGGACACTATGAATACTATAAGAATTATGATGACCTAGAGATCCATTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCATGCCTTGCTAAaaagtttgttgtttttcaATCTGAAGCAGAGATGAAGAGGCACAATACTGTGGAGCATGGAGGGCGTATGTCACGGTCAAAACGGAATGCTGCTCTTCAGATACCAACCAGCTTTCGATACAGACGCAACAATGAACAGGACCAACGACGTGCAAGGGGTCGGTCATTTCATCGTGATTTTTCTGAAAGTCAACTTTCGGCCATTCAAGCCAGTTTGGAGACATCCAATGCGGAGGGTGTATTGCTTGATACATCAACATCAAGCAATGATCAAGCTAACATTGACATTGATCCAATCATTCAGCCATTTGAATCATTAACCACAGCAGGTTCTGAAACTTCTTCAAGATACCTTCAAGCCTTGGGacataattcaaaatatgcaCCACTAGAAGATTCTTCCTTTCCTCCTCTCTCCATGGGTTCCAGCAACAGCCAGCAAAAACCTAAACACGACTCAGAAGGCTCTTCCAGTAATACTATGGCAGCCCTTTTGCGCGGGCACGGCAACAGAAAAGTATCTGTTCTTAATTCTGGTGCTCTTGGTTTGCCAGTAGCAAGTCGTGGACATGTGCCATCATCTAGTAATCCTACACAATCTAGACCTTCAACAAATACTGTTTCTGCTGTGTCTCATAATTCTGGTCAGACGAAGACTGCTCTCAATAGTGGACCTGCACCATCAACTTATGCTAGTTCTATTCAGGCTACACATAGAACACATGGGTATTTCTATCCTGGTCCTTCAAGGGATTTGCATGATAATGGTAGAATTGTTCACTCGGCTTCTGCTCCAAATCTTGGTGAGAAAGGACTTATGGAACCTTCGATTTCTGATTTTCCGCCGGTTTCTGCTGCACAAGTGAGCAAGTTGCCTGTAAGCAGCCAGTCAGCGCTAAATGGGGAGCATGTTCACACCGCTAACAAGTCATTGGTTGAAAAGATTCGTCGTGCTCTTGAATTTGATCAAGATAGATACGCTATTTTTAAAGAGATATCTGCACAATACCGTCAAGGATTAATTGATACAGGTGCATATCTGGACTATGTGCAGCAGTTTGGTTTGCCTCATCTTGTGCTGGAGTTGGCTAGACTCTGCCCTGATCCTCAGAAGCAGAAAGAGCTAATTGACTCTTATAATGCCCGTTTGCAAGTGAATTCTCTATATGAAAATGGTTGGGGCCGGGGTAAAGGTAAATCTGTAGTCACAGTCAGCAATATCTCCAAGAAAGGTAAAGGTAAATCTGTAGATGGTGAAGAGAGTAACCCCAAAGATAAATTAGCGGATAGCTTTTTAAGCACTGTACATAAACTGCAGTCGAATTATAATCCTTCAGAAGAGGTGCTGTCAAAGGGTGATTACCGCACTACTAAAGGCAAATCAAAAGTACAGGTTGAGCAGCAGAAGACTGATACAACTTTTGGTAGTCAACAACCCAATGAACCCGTGACGAGCCTTAGTGGGCATAATGAGTCATCAGTTGGCAGTTTATCTAATTCAAATAGAGGGGATGGGGGTGGTGGCAGCAAGCAACGCAAGAAAACTTCTAAGTTCCTCAGAGTCCGCCTTGGTGATGGTTCTGTAGAAGCACTttctgattttaaaaattcacatAGTGATTCAGATACTGGATCAACAGATAAAGTTGGAGGCGACCAGAATGACCCTCGGGGCCTGCCTGTGCGAGGTGTTTGGCGAAGTGGTGGAGGTCATAAATATTATGAGATTTG 2513 0.431 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICEDSRCCICKTECNVVFVTKALGDYTRMISDFSVLPSDVREGYVGSYWFHEDTNSYFDDVDQYKMIKAMCRLSCSVCDKMEEQPQDAAKRRQRFRNIEQLKGHLFHRHRLLMCRLCFEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGHYEYYKNYDDLEIHFRQEHFLCEDEACLAKKFVVFQSEAEMKRHNTVEHGGRMSRSKRNAALQIPTSFRYRRNNEQDQRRARGRSFHRDFSESQLSAIQASLETSNAEGVLLDTSTSSNDQANIDIDPIIQPFESLTTAGSETSSRYLQALGHNSKYAPLEDSSFPPLSMGSSNSQQKPKHDSEGSSSNTMAALLRGHGNRKVSVLNSGALGLPVASRGHVPSSSNPTQSRPSTNTVSAVSHNSGQTKTALNSGPAPSTYASSIQATHRTHGYFYPGPSRDLHDNGRIVHSASAPNLGEKGLMEPSISDFPPVSAAQVSKLPVSSQSALNGEHVHTANKSLVEKIRRALEFDQDRYAIFKEISAQYRQGLIDTGAYLDYVQQFGLPHLVLELARLCPDPQKQKELIDSYNARLQVNSLYENGWGRGKGKSVVTVSNISKKGKGKSVDGEESNPKDKLADSFLSTVHKLQSNYNPSEEVLSKGDYRTTKGKSKVQVEQQKTDTTFGSQQPNEPVTSLSGHNESSVGSLSNSNRGDGGGGSKQRKKTSKFLRVRLGDGSVEALSDFKNSHSDSDTGSTDKVGGDQNDPRGLPVRGVWRSGGGHKYYEI 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03138 837 MobiDBLite consensus disorder prediction 712 726 - -
Bva04g03138 837 MobiDBLite consensus disorder prediction 703 778 - -
Bva04g03138 837 MobiDBLite consensus disorder prediction 790 837 - -
Bva04g03138 837 MobiDBLite consensus disorder prediction 389 419 - -
Bva04g03138 837 MobiDBLite consensus disorder prediction 447 493 - -
Bva04g03138 837 CDD RING-HC_ZNF598 5 46 IPR041888 -
Bva04g03138 837 MobiDBLite consensus disorder prediction 450 493 - -
Bva04g03138 837 PANTHER ZINC FINGER PROTEIN 598 1 834 IPR044288 GO:0061630|GO:0072344
Bva04g03138 837 MobiDBLite consensus disorder prediction 727 767 - -
Bva04g03138 837 SMART c2h2final6 251 280 IPR013087 -
Bva04g03138 837 SMART c2h2final6 108 144 IPR013087 -
Bva04g03138 837 SMART c2h2final6 220 250 IPR013087 -
Bva04g03138 837 SMART c2h2final6 196 219 IPR013087 -
Bva04g03138 837 MobiDBLite consensus disorder prediction 793 811 - -
Bva04g03138 837 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Bva04g03138 837 MobiDBLite consensus disorder prediction 397 419 - -
Bva04g03138 837 PANTHER EBR1 1 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03138 Bva-Chr4 25759550 25764002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03138 1 834 C2H2 Transcription Factor Family AT3G62240 52.074 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03138 K22381 - gmx:100780426 1192.18