Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03133 ATGGTGGCAGATGCAGAACTTGTTTGTCAACAGAGCATCCCGGTGTTGGATGTGCAATATTTAGCTAAAGGAAGCGGCAACATTCATGAGATTGAAGATGCATCTCCGGTCATGCCTCCGAGTTTTGAACGAGTTCGTGATTCTGAATTAGTCTCTGCCGAGTTACTGTCTTCGCAAGAAGATGTTAGACCTGCATACGGATTCTCAGATGCTGCTCTTGACGCTACTCTGCAATATGTTCCCAGCATCCGTTCTGGCAGTTTTGCTGCTATTGGGCCACGCAGATACATGGAAGATGAACATATAAGGATAGATGATCTGTCTTCACACCTAGGATCACTGTATAAATTTCCTAAACCAAGTGCCTTTTATGGGGTATTTGATGGTCATGGAGGACCAGAAGCTGCAGCTTATATTAGGAAAAATGTAATGAGGCTCTTTTTTGAGGATGTCAGTTTCCCCCAGACATCCGAagttgatattattttcttacaagAGGTAGAGAGTTCCCTAAGGAAGGCATTTCTTTTGGCTGACTCAGCTTTGGCTGATGATTGCAGTGTGAGCAGCTCATCAGGGACCACGGCCCTCACTGCTTTGATTTTTGGAAGGCTTCTTATGGTGGCTAATGCCGGTGATTGTCGAGCAGTTCTCTGCCGTAAAGGAGAGGCAATTGACATGTCTGAAGATCACAGGCCTATTTACCCATCAGAACGGAAACGAGTTGAGGAATTGGGTGGCTACGTAGATGATGGTTATCTAAATGGAGTTTTATCAGTAAGTCGAGCGCTTGGGGACTGGGATATGAAGTTTCCTCGGGGTTCGCCTTCACCTCTGATTGCAGAGCCCGAGCTCCGGCAAGTGATTCTAACAGAGGATGATGAATTCCTTATCATAGGATGTGATGGGATTTGGGATGTAATGTCAAGTCAGCATGCAGTGAGCCTTGTTCGTCGAGGGCTAAGGCGGCACGATGACCCGGAGCAGTGTGCCAGGGACCTAGTCATGGAGGCATTGCGGCTCAAGACATTTGACAATCTTACAGTAATTATTGTGTGCTTCTCTTCCCTCGATCACAGGGACTCTTCCCCTCCTCGACAACGCAGGTTGAAGTGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGGACTTTGTTGGAAGGCAGCCCCAACAACTG 1181 0.4674 MVADAELVCQQSIPVLDVQYLAKGSGNIHEIEDASPVMPPSFERVRDSELVSAELLSSQEDVRPAYGFSDAALDATLQYVPSIRSGSFAAIGPRRYMEDEHIRIDDLSSHLGSLYKFPKPSAFYGVFDGHGGPEAAAYIRKNVMRLFFEDVSFPQTSEVDIIFLQEVESSLRKAFLLADSALADDCSVSSSSGTTALTALIFGRLLMVANAGDCRAVLCRKGEAIDMSEDHRPIYPSERKRVEELGGYVDDGYLNGVLSVSRALGDWDMKFPRGSPSPLIAEPELRQVILTEDDEFLIIGCDGIWDVMSSQHAVSLVRRGLRRHDDPEQCARDLVMEALRLKTFDNLTVIIVCFSSLDHRDSSPPRQRRLKCCSLSAEALCSLRTLLEGSPNN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03133 393 Gene3D - 74 361 IPR036457 -
Bva04g03133 393 SMART PP2C_SIG_2 99 354 IPR001932 -
Bva04g03133 393 PANTHER PROTEIN PHOSPHATASE 2C 1 373 IPR015655 GO:0004722|GO:0006470
Bva04g03133 393 ProSiteProfiles PPM-type phosphatase domain profile. 84 354 IPR001932 -
Bva04g03133 393 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 373 - -
Bva04g03133 393 SUPERFAMILY PP2C-like 78 356 IPR036457 -
Bva04g03133 393 SMART PP2C_4 74 352 IPR001932 -
Bva04g03133 393 Pfam Protein phosphatase 2C 90 346 IPR001932 -
Bva04g03133 393 CDD PP2Cc 83 354 IPR001932 -
Bva04g03133 393 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03133 Bva-Chr4 25748994 25751680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03133 97 389 PP2C-type Phosphatase Gene Family AT3G62260 70.068 2.39e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03133 K14803 - gmx:100819791 617.846