Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03113 ATGGAGAAGAAGGAGATGCTGCAGGCTGTGAAGACTGAGGATGCAATTGGATCCTCTCCATTTCCTAATAGTTTCACTTCAAACAGTTACCCATTCTCGAGCGTATTTGATTTCTGTGAAGTGGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGAATTTAGTCCTCTGCTGGATTTGCCTCAAGTCTCAACCATGCCTTCCTCTGCTCTCAAAGATCCATCTGAGACTGCCAAAGAGTGTTCGGAGGTGTTGAATCAGCAGCCTGCTACTCCAAACTCTTCATCGATCTCATCTGCGTCCAGTGAGGCGCTGAATGACGATCGGCATAAAGGGGAACAAGAAGAACAGCAGAAGACCAAGAAACAGTTGAAAGCTAAGAAGACAAATCAGAAGAGACAGAAAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCcaggAGCTACTATCGTTGCACCAGTGCATCATGTAATGTGAAGAAACGAGTAGAGAGATCTTTTAATGATCCAAGTATTGTGGTGACAACCTATGAAGGCCAACACACACATCCAAGTCCAGTTATGCCTCGTTCAACCCTCGCCGGAGCTTCATTACCGCAAGGTATCTCCACCGGCAGCGCCAACACCTTTGGTTCATTAATGCCGGGAAACCTTTTCCTGTATCAGCAACGCAACCATCAACAGCAGCAACAACTTCTTAATACGTTACAATCTTTGGGTTTTCCTTACAATGATTCGACTCCAAAGAACATTGCTTTCCCTAGAGAAAGACGGCTTCGCAATGCAGGGACAGCGCCGGCTTTCCTTAGCGACAATGGGCTTCTTCAAGACATTGTTCCCTCTCATATGTTGAAAGAAGAGTA 944 0.4566 MEKKEMLQAVKTEDAIGSSPFPNSFTSNSYPFSSVFDFCEVEKSSLGFMELLGVQEFSPLLDLPQVSTMPSSALKDPSETAKECSEVLNQQPATPNSSSISSASSEALNDDRHKGEQEEQQKTKKQLKAKKTNQKRQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFNDPSIVVTTYEGQHTHPSPVMPRSTLAGASLPQGISTGSANTFGSLMPGNLFLYQQRNHQQQQQLLNTLQSLGFPYNDSTPKNIAFPRERRLRNAGTAPAFLSDNGLLQDIVPSHMLKEE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03113 314 Gene3D WRKY domain 137 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03113 314 MobiDBLite consensus disorder prediction 83 106 - -
Bva04g03113 314 Pfam WRKY DNA -binding domain 154 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03113 314 SMART WRKY_cls 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03113 314 PIRSF WRKY_txn_fact_IIc 1 314 IPR017396 GO:0003700
Bva04g03113 314 MobiDBLite consensus disorder prediction 68 139 - -
Bva04g03113 314 PANTHER WRKY TRANSCRIPTION FACTOR 1 306 - -
Bva04g03113 314 MobiDBLite consensus disorder prediction 1 23 - -
Bva04g03113 314 SUPERFAMILY WRKY DNA-binding domain 145 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03113 314 MobiDBLite consensus disorder prediction 107 126 - -
Bva04g03113 314 ProSiteProfiles WRKY domain profile. 148 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03113 314 Coils Coil 117 137 - -
Bva04g03113 314 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 306 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03113 Bva-Chr4 25662876 25664732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03113 26 314 WRKY Transcription Factor Family AT2G47260 48.680 1.39e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva04g03113 WRKY 6.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03113 - - aprc:113872234 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03113 04 25662876 25664732 Bva13g03081 13 21768558 21770564 BWGD